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Cluster goblin.sharcnet.ca

Links System documentation in the SHARCNET Help Wiki

Manufacturer Sun
Operating System CentOS 6.3
Interconnect Gigabit Ethernet
Total processors/cores 648
Nodes
goblin: 1‑15
4 cores
2 sockets x 2 cores per socket
AMD Opteron @ 2.4 GHz
Type: Compute
Notes: N/A
Memory: 8.0 GB
Local storage: 160 GB
goblin: 16‑20
16 cores
2 sockets x 4 cores per socket
Intel Xeon @ 2.53 GHz
Type: Compute
Notes: This is an 8-core node with hyperthreading on. The hyperthreading makes the node look as if it had 16 cores. The scheduler has been configured to use only 8 cores.
Memory: 12.0 GB
Local storage: 0 Bytes
goblin: 21‑36
8 cores
2 sockets x 4 cores per socket
Intel Xeon @ 2.27 GHz
Type: Compute
Notes: This is a subsystem contributed by Dr. Peter Rogan of Western University, dedicated to human genome research.
Memory: 48.0 GB
Local storage: 1000 GB
goblin: 37‑48
24 cores
2 sockets x 12 cores per socket
AMD Opteron @ 2.6 GHz
Type: Compute
Notes: This is a subsystem contributed by Dr. Lance Lochner et al of Western University, dedicated to the research in economics.
Memory: 64.0 GB
Local storage: None
goblin: 49
12 cores
2 sockets x 6 cores per socket
Intel Xeon @ 2.3 GHz
Type: Compute
Notes: This system has two Intel Xeon Phi coprocessors installed with 60 cores each, running in total 240 threads.
Memory: 32.0 GB
Local storage: 500 GB
goblin: 50
32 cores
4 sockets x 8 cores per socket
Intel Xeon @ 2.2 GHz
Type: Compute
Notes: This system is purchased and contributed by Dr. Lucian Ilie of computer science department at Western University for research in bioinformatics and mathematics.
Memory: 1024.0 GB
Local storage: 150 GB
goblin: 51‑54
12 cores
2 sockets x 6 cores per socket
Intel Xeon @ 2.0 GHz
Type: Compute
Notes: These servers were purchased and contributed by Dr. Lucian Ilie of computer science department at Western University for research in bioinformatics and mathematics.
Memory: 256.0 GB
Local storage: 150 GB
Total attached storage None
Suitable use

Note: This system is contributed by a research group. The contributing group has the benefit of access to the resources on a preferential basis as determined on a "best efforts" basis by the SHARCNET system administrator. Jobs submitted by contributing group have a higher priority than others. For the policies on the contribution of systems, please refer to Contribution of Computational Assets to SHARCNET.

Software available

MAPLE, UTIL, SIESTA, BLAST, GCC, ABAQUS, NCBIC++TOOLKIT, GIT, FREEFEM++, PYTHON, CMAKE, IMSL, OCTAVE, R, DAR, PARI/GP, PETSC_SLEPC, NETCDF, ORCA, GAUSSIAN, NCL, MATLAB, GNU , OPENMPI, MERCURIAL, OPENJDK, ESPRESSO, PERL, FDTD, BIOPERL, CDF, HDF, INTEL, GMP, SAMTOOLS, TINKER, BOOST, BIOSAMTOOLS, ACML, QD, MrBAYES, SUBVERSION, GROMACS, BINUTILS, OPEN64, VIM, SPRNG, ADF/BAND, GEANT4, FFTW, MPFR, MPFUN2015, VALGRIND, TEXLIVE, MKL, RLWRAP, YT, MPC, MPFUN90, CHARM++, PNETCDF, COREUTILS, SUPERLU, GNUPLOT, IPM, GSL, COMSOL, MPIBLAST, SQ, ILOGCPLEX, PGI, OPENCV, CPAN, LDWRAPPER, ARPACK-NG, EMACS, RUBY, NIX, PROOT, GHC, BIOPERLRUN, AUTODOCKVINA

Current system state details Graphs

Recent System Notices

Status Status Notes
Aug 04 2017, 02:07PM
(13 days ago)

Cluster has been recovered after the power outage yesterday.

Aug 03 2017, 11:36AM
(14 days ago)

There is a power failure at UWO. All running jobs were killed. Storage for some /work and /home users are currently still available. If power isn’t restored in ~ 30min they will also have to be shutdown.

Apr 20 2017, 12:30PM
(4 months ago)

Cluster is back up after the power outage, only a couple of nodes remain offline.

Apr 20 2017, 12:18PM
(4 months ago)

A brief power outage due to an electrical storm has forced goblin, dusky and parts of kraken offline. We are working to restore service now.

Feb 27 2017, 11:14AM
(6 months ago)

Cluster is back up after the power outage

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