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R (Application)

Introduction

R is a language and environment for statistical computing and graphics. R provides a wide variety of statistical (linear and nonlinear modelling, classical statistical tests, time-series analysis, classification, clustering, …) and graphical techniques, and is highly extensible. The S language is often the vehicle of choice for research in statistical methodology, and R provides an Open Source route to participation in that activity. [http://www.r-project.org/]

Availability Table

System Versions
iqaluk 3.3.2, 2.15.3, 3.1.1, 3.0.2, 3.5.1, 3.4.3, 3.2.5, 3.2.3, 3.2.0, 3.2.1
wobbie 3.3.2, 2.15.3, 3.1.1, 3.0.2, 3.5.1, 3.4.3, 3.2.5, 3.2.3, 3.2.0, 3.2.1
dusky 3.3.2, 2.15.3, 3.1.1, 3.0.2, 3.5.1, 3.4.3, 3.2.5, 3.2.3, 3.2.0, 3.2.1
copper 3.3.2, 2.15.3, 3.1.1, 3.0.2, 3.5.1, 3.4.3, 3.2.5, 3.2.3, 3.2.0, 3.2.1
vdi-centos6 3.3.2, 2.15.3, 3.1.1, 3.0.2, 3.5.1, 3.4.3, 3.2.5, 3.2.3, 3.2.0, 3.2.1
goblin 3.3.2, 2.15.3, 3.1.1, 3.0.2, 3.5.1, 3.4.3, 3.2.5, 3.2.3, 3.2.0, 3.2.1
mosaic 3.3.2, 2.15.3, 3.1.1, 3.0.2, 3.5.1, 3.4.3, 3.2.5, 3.2.3, 3.2.0, 3.2.1

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Announcements

o Mon Oct 2, 2018: Module version r/3.5.1 is installed. Use of the system gcc compiler
(the default as with earlier sharcnet r modules) is recommended. For packages that require
a newer compile, load gcc/8.2.0 after loading the r/3.5.1 module.

Change Log

  • Oct 2, 2018: Installed r/3.5.1 on angel, copper, dusky, goblin, iqaluk, monk, mosaic, orca, redfin, vdi-centos6, windeee, wobbie.
  • Dec 1, 2017: Installed r/3.4.3 on angel, copper, dusky, goblin, iqaluk, monk, mosaic, orca, redfin, tembo, vdi-centos6, windeee and wobbie.
  • Dec 7, 2016: Installed r/3.3.2 on angel, brown, copper, dusky, goblin, iqaluk, kraken, monk, mosaic, orca, redfin, saw, tembo, vdi-centos6, windeee and wobbie.
  • Dec 6, 2016: Installed r/3.2.5 on angel, brown, copper, dusky, goblin, iqaluk, kraken, monk, mosaic, orca, redfin, saw, tembo, vdi-centos6, windeee and wobbie.
  • Jan 26, 2016: Installed r/3.2.3 on angel, brown, copper, goblin, iqaluk, kraken, monk, mosaic, orca, redfin, saw, tembo, vdi-centos6, windeee, wobbie and r/3.2.1 on iqaluk.
  • Aug 8, 2015: Installed r/3.2.1 on angel, brown, copper, goblin, kraken, monk, mosaic, orca, redfin, saw, tembo, vdi-centos6, windeee and wobbie. Installation on iqaluk pending.
  • Jun 10, 2015: Installed r/3.2.0 on angel, brown, copper, goblin, hound, iqaluk, kraken, monk, mosaic, orca, redfin, saw, tembo, vdi-centos6 and wobbie.
  • Dec 4, 2014: Installed r/3.1.1, r/3.0.2, r/2.15.3 on mosaic.
  • Dec 4, 2014: Installed r/3.1.1, r/3.0.2, r/2.15.3 and glibc-devel.i686 on vdi-centos6. Installed R-3.1.2 and glibc-devel.i686 on vdi-fedora20.
  • Jul 29, 2014: Removed r/3.0.1 from angel, brown, goblin, hound, iqaluk, kraken, monk, orca, redfin, saw and wobbie. Also removed r/2.15.0 from goblin.
  • Jul 11, 2014: Removed r/3.1.0 and installed r/3.1.1 on angel, brown, goblin, hound, iqaluk, kraken, monk, orca, redfin, saw and wobbie
  • Jul 9, 2014: Installed r/3.1.0 on angel, brown, goblin, hound, iqaluk, kraken, monk, orca, redfin, saw and wobbie
  • Apr 17, 2014: Reinstalled r/2.12.2 on guppy and mako for ticket 22758. Removed r/2.15.3 and r/3.0.1 as previously announced on Mar2
  • Mar 21, 2014: Removed r/2.10.1 from guppy. Removed r/2.12.2 and r/2.14.2 from guppy and brown. Removed r/2.15.0 from angel, brown, goblin, guppy, hound, iqaluk, kraken, mako, monk, orca, redfin and saw. Installed r/2.15.3 and r/3.0.1 on wobble
  • Feb 8, 2014: Added r/3.0.2 to angel, brown, goblin, hound, iqaluk, kraken, monk, orca, redfin, saw and wobbie
  • Jun 3, 2013: Version 2.13.2 was removed from guppy
  • May 29, 2013: Version 3.0.1 added to angel, brown, goblin, gulper, guppy, hound, iqaluk, kraken, mako, monk, orca, redfin, saw and tope
  • Apr 25, 2013: Old R version 2.12.2 and 2.14.2 added back to brown for testing purposes
  • Apr 24, 2013: Versions 10.0, 10.1, 11.1, 12.2, 13.2, 14.2 removed from tope gulper, guppy, mako, kraken and tope
  • Apr 19, 2013: Added version 2.15.3 to all clusters which uses mkl instead of acml
  • Oct 25, 2012: Reinstalled 2.15.0 on orca and goblin with new module to removed automatic module loads and replaced with equivilent conflict statements. Added 2.15. to iqaluk
  • Jun 25, 2012: Manually installed rgdal on tope under /opt/sharcnet/local/R_local
  • Apr 26, 2012: Installed version 2.15.0 on sharcnet clusters, includes threaded lapack and automatically loads the gcc compiler when the “module switch r/2.15.0” command is issued
  • Mar 15, 2012: Installed version 2.14.2 on sharcnet clusters, includes threaded lapack and automatically loads the gcc compiler when the “module switch r/2.14.2” command is issued