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Cluster wobbie.sharcnet.ca

Links System documentation in the SHARCNET Help Wiki

Manufacturer HP, Dell
Operating System CentOS 6
Interconnect Gigabit
Total processors/cores 1456
Nodes
wobbie: 1‑64
2 cores
2 sockets x 1 core per socket
AMD Opteron @ 1.8 GHz
Type: Compute
Notes: Compute node
Memory: 4.0 GB
Local storage: 40 GB
wobbie: 65‑96
2 cores
2 sockets x 1 core per socket
AMD Opteron @ 1.8 GHz
Type: Compute
Notes: Compute node
Memory: 8.0 GB
Local storage: 40 GB
wobbie: 97‑100
4 cores
4 sockets x 1 core per socket
AMD Opteron @ 2.6 GHz
Type: Login
Notes: Login/Dev node
Memory: 32.0 GB
Local storage: 450 GB
wobbie: 101‑132
32 cores
2 sockets x 16 cores per socket
AMD Opteron @ 2.3 GHz
Type: Compute
Notes: Compute node
Memory: 32.0 GB
Local storage: 1.95 TB
wobbie: 141‑142
24 cores
2 sockets x 12 cores per socket
Intel Xeon E5-2690 v3 @ 2.6 GHz
Type: Compute
Notes: Compute node
Memory: 768.0 GB
Local storage: 14.6 TB
143‑147
24 cores
2 sockets x 12 cores per socket
Intel Xeon E5-2690 v3 @ 2.6 GHz
Type: Compute
Notes: Compute node
Memory: 128.0 GB
Local storage: 3.91 TB
148‑149
28 cores
2 sockets x 14 cores per socket
E5-2697 v3 @ 2.6 GHz
Type: Compute
Notes: Compute node
Memory: 512.0 GB
Local storage: 62.5 TB
Total attached storage None
Suitable use

General 64 bit cluster.
Note: This system is contributed by a research group. Jobs submitted by contributing groups have a higher priority than others. For the policies on the contribution of systems, please refer to Contribution of Computational Assets to SHARCNET.

Software available

ILOGCPLEX, GAUSSIAN, COREUTILS, ANSYS, NETCDF, VIM, ADF/BAND, FREEFEM++, OPENMPI, R, CMAKE, PYTHON, SIESTA, BLAST, PARI/GP, OCTAVE, RLWRAP, HDF, SPRNG, MKL, MERCURIAL, SAMTOOLS, ABINIT, NAMD, GCC, DAR, BOOST, LAMMPS, GROMACS, BIOSAMTOOLS, MrBAYES, PETSC_SLEPC, BIOPERL, PERL, MATLAB, INTEL, OPEN64, CPMD, QD, OPENJDK, SUBVERSION, MPFUN2015, UTIL, GMP, FFTW, MPFUN90, PNETCDF, FDTD, TEXLIVE, GNUPLOT, GSL, MPC, BIOPERLRUN, MPFR, IPM, PGI, OPENCV, BINUTILS, LDWRAPPER, ARPACK-NG, CPAN, RUBY, NIX, ACML, PROOT, GHC, VMD, EMACS, NCL, GEANT4, AUTODOCKVINA

Current system state details Graphs

Recent System Notices

Status Status Notes
Feb 27 2017, 11:53AM
(about 13 hours ago)

The chiller most relevant for Wobbie continues to be under repair – the problem was a coolant leak, which was found and is being patched. Full service should return by tomorrow.

Feb 24 2017, 12:32AM
(4 days ago)

A power failure at the McMaster datacenter has caused most nodes to reboot; running jobs were killed.

Feb 13 2017, 02:27PM
(14 days ago)

Some Wobbie nodes are set to drain and will be shut down to reduce heat load. This will not affect running jobs, but some jobs (bigger memory or requiring AVX/AVX2) may see higher wait times.

Jan 27 2017, 11:32AM
(about 1 month ago)

Wobbie is operating normally. Additional local storage is available as /project0 and /project1 (email hahn@sharcnet.ca or open a ticket for access).

Jan 23 2017, 09:50AM
(about 1 month ago)

Some Wobbie nodes are shut down to minimize power dissipation while a cooling problem is fixed.

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