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VMD (Visualization)

Introduction

VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.

Availability Table

Version Default Module Systems
1.9.1 True vdi-centos6, viz10-uwo, viz11-uwo

Documentation

https://www.sharcnet.ca/help/index.php/VMD

Mailing List

To sign up for email notices about pending version updates, removals and other important announcements for this software package, sign in.

Announcements

Latest Email Sent to the [SHARCNET VMD]
Mailing List: Tue Nov 4 16:43:04 EST 2014

Please note that on Nov11/2014 the vmd/1.8.7 sharcnet module
will be removed from all clusters and workstations.  Also
the vmd/1.9.1 module will be removed from all clusters and
workstations where it is currently installed and relocated
to vdi-centos6.user.sharcnet.ca, viz10-uwo.sharcnet.ca and
viz11-uwo.sharcnet.ca visualization machines.  If there are
any concerns with this change please submit a ticket to
https://www.sharcnet.ca/my/problems/submit asap thanks.

Change Log

o Nov 26, 2014: Removed vmd/1.8.7 and vmd/1.9.1 modules from sharcnet clusters.
o Nov 4, 2014: Installed vmd/1.9.1 onto vdi-centos6, viz10-uwo and viz11-uwo.
o Jun 13, 2011: Upgraded 1.8.7a63 alpha version to full 1.8.7 release on requin, rainbow and saw. The default 1.8.6 version can be overriden by doing “module load vmd/1.8.7” upon login.
o Jan 15, 2013: Removed legacy version 1.8.6 from all systems and added 1.9.1