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Publication: Structural prediction of the Trp-cage miniprotein based on the ECEPP/3 force field

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Title Structural prediction of the Trp-cage miniprotein based on the ECEPP/3 force field
Authors/Editors* Lixin Zhan, Jeff Z. Y. Chen, Wing-Ki Liu
Where published* Proteins: Struct. Funct. Bioinfo.
How published* Journal
Year* 2006
Volume 66
Number -1
Pages 436-443
Publisher
Keywords basin paving, Trp-cage, global minimum
Link
Abstract
We report a Monte Carlo simulation of the Trp-cage miniprotein with the ECEPP/3 potential using the recently proposed basin paving global optimization method. The lowest energy conformation in vacuo has been located. It is similar to the NMR structure (PDB code 1L2Y). The backbone root mean square deviation between them is 2.24 AA.
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