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  • 10:43, 3 September 2021 Ppomorsk (Talk | contribs) deleted page JupyterViaViznode (content was: "{{Draft}} = Accessing Jupyter Notebook with the Graham Visualization Node = == Introduction == ==Installing Jupyter Notebook== For more details on the Jupyter soft..." (and the only contributor was "Edward"))
  • 10:40, 3 September 2021 Ppomorsk (Talk | contribs) deleted page ESPRESSO (content was: "{{Template:CCDelete}} {{Outdated}} {{Software |package_name=ESPRESSO(PWSCF) |package_description=Plane-Wave Self-Consistent Field |package_idnumber=42 }} ==Introduction== Espresso, formerly named PWscf (Plane-Wave Self-Consistent Field),...")
  • 10:39, 3 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ (content was: "#REDIRECT Knowledge Base" (and the only contributor was "Dbm"))
  • 10:38, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Online Seminars (content was: "Please use this page instead: https://helpwiki.sharcnet.ca/wiki/Online_Seminars" (and the only contributor was "Syam"))
  • 10:37, 3 September 2021 Ppomorsk (Talk | contribs) deleted page UWO Deliveries (content was: "Moved here: https://www.sharcnet.ca/help/index.php/UWO_Deliveries")
  • 10:36, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Linux and vi Editor Fundamentals (content before blanking was: " == Objectives == This self-directed tutorial is mainly for people who have none or very little experience in Linux system, particularly for Windows users who want to migrate to SHARCNET Linux systems. Examples shown i...")
  • 10:36, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Knowledge Base (content was: "The page moved here: https://helpwiki.sharcnet.ca/wiki/FAQ")
  • 10:36, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Dusky (content was: "Moved here: https://helpwiki.sharcnet.ca/wiki/Dusky")
  • 10:34, 3 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: Programming and Debugging (content was: "The page moved here: https://helpwiki.sharcnet.ca/wiki/FAQ")
  • 10:34, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Summer Schools (content was: "Moved here: https://www.sharcnet.ca/help/index.php/Summer_Schools" (and the only contributor was "Syam"))
  • 10:34, 3 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: Compiling and Running Programs (content was: "The page moved here: https://helpwiki.sharcnet.ca/wiki/FAQ")
  • 10:33, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Summer School Courses (content was: "Moved to https://helpwiki.sharcnet.ca/wiki/Summer_School_Courses" (and the only contributor was "Syam"))
  • 10:32, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Wiki tips and hints (content before blanking was: "This page is for tips and hints on using our wiki pages, things which are not trivial or generally known. Please use <nowiki> <nowiki> wiki syntax </nowiki> </nowiki> to actually show the raw wikimedia syntax. {{NeedsG...")
  • 10:31, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Parallel I/O introductory tutorial (content before blanking was: "{{Template:GrahamUpdate}} This self-study tutorial will discuss issues in handling large amount of data in HPC and also discuss a variety of parallel I/O strategies for doing large-scale Input/Output (I/O) with parallel...")
  • 10:31, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Staff: Armin Sobhani (content was: "200px * Armin was a senior researcher at the [http://bsc.es Barcelona Supercomputing Center (BSC)] prior to joining SHARCNET. *..." (and the only contributor was "Asobhani"))
  • 10:31, 3 September 2021 Ppomorsk (Talk | contribs) deleted page Staff: Sergey Mashchenko (content before blanking was: "150px * Sergey has been with SHARCNET since 2006. * His research background is in computational astrophysics and cosmology. * His primary HPC expertise is in parallel code development (programmi...")
  • 10:30, 3 September 2021 Ppomorsk (Talk | contribs) deleted page OpenMP (content before blanking was: "This tutorial introduces basic OpenMP concepts and issues to run OpenMP codes on SHARCNET and Compute Canada systems. To learn more about parallel programming with OpenMP, please see the references provided at the end of...")
  • 16:34, 2 September 2021 Ppomorsk (Talk | contribs) deleted page MAPLE (content was: "{{StillNeeded|goblin}} {{Software |package_name=MAPLE |package_description=A sophisticated computer algebra system for symbolic and numerical computing |package_idnumber=126 }} ==Introduction== Maple is a sophisticated computer algebra...")
  • 14:34, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Hyper-Q (content before blanking was: "==Overview== Hyper-Q (or MPS) is a new hardware/software feature of NVIDIA GPUs. It is available in GPUs with CUDA capability 3.5 and higher. It is available on P100 and V100 GPUs in the Compute Canada clusters cedar, gr...")
  • 14:33, 2 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: About SHARCNET (content was: "<!--This page is transcluded to the main FAQ page. If you make changes here, make sure the changes show up on the main FAQ page. You may have to make an edit to the main FAQ page to force a refresh. --> == About SHARCNET == === What i...")
  • 14:33, 2 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: Getting an Account with SHARCNET and Related Issues (content was: "<!--This page is transcluded to the main FAQ page. If you make changes here, make sure the changes show up on the main FAQ page. You may have to make an edit to the main FAQ page to force a refresh. --> == Getting an Account with SHARC...")
  • 14:33, 2 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: Getting Help (content was: "<!--This page is transcluded to the main FAQ page. If you make changes here, make sure the changes show up on the main FAQ page. You may have to make an edit to the main FAQ page to force a refresh. --> == Getting Help == === I have...")
  • 14:33, 2 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: Research at SHARCNET (content was: "<!--This page is transcluded to the main FAQ page. If you make changes here, make sure the changes show up on the main FAQ page. You may have to make an edit to the main FAQ page to force a refresh. --> == Research at SHARCNET == ===...")
  • 14:32, 2 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: Contacting SHARCNET (content was: "<!--This page is transcluded to the main FAQ page. If you make changes here, make sure the changes show up on the main FAQ page. You may have to make an edit to the main FAQ page to force a refresh. --> == Contacting SHARCNET == ===...")
  • 14:32, 2 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: What types of research programs / support are provided to the research community? (content was: "<!--This page is transcluded to the main FAQ page. If you make changes here, make sure the changes show up on the main FAQ page. You may have to make an edit to the main FAQ page to force a refresh. --> == What types of research progra...")
  • 14:32, 2 September 2021 Ppomorsk (Talk | contribs) deleted page FAQ: How to Acknowledge SHARCNET in Publications (content was: "<!--This page is transcluded to the main FAQ page. If you make changes here, make sure the changes show up on the main FAQ page. You may have to make an edit to the main FAQ page to force a refresh. --> == How to Acknowledge SHARCNET i...")
  • 14:29, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Using gnuplot (content was: "=Introduction= Gnuplot is a command-line driven graphing utility that is copyrighted but freely distributed. Designed for efficient and interactive visualization of mathematical functions and data. It has the capacity for generating publ...")
  • 14:29, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Gnuplot demo 3d hidden surface orca.png
  • 14:29, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Gnuplot demo 3d surfaces1 orca.png
  • 14:29, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Gnuplot demo multiaxis orca.png
  • 14:28, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Java (content was: "{{Template:CCDelete}} {{Software |package_name=OPENJDK |package_description=Open source implementation of Java SE. |package_idnumber=66 }} {{Template:GrahamUpdate}} =Introduction= Java is a general-purpose, object-oriented language whic...")
  • 14:27, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Getting Started (content before blanking was: "==Getting Started== * FAQs * Getting an Account with SHARCNET (online reference) * Attending SHARCNET Webinars (online reference) * Choosing A Password (self-directed tutorial) * SSH|SSH...")
  • 14:26, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Templete:CCDelete (content was: "{| cellpadding=5 style="border:4px solid #BF4513" |- bgcolor="#FFF8DC" | This page is scheduled for deletion because it is redundant with information available on t..." (and the only contributor was "Edward"))
  • 14:25, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Getting started with Cloud Computing (content was: "{{Template:GrahamUpdate}} =About= Cloud computing is a method of sharing computing resources. While the resources are shared the end user has their own isolated c..." (and the only contributor was "Edward"))
  • 14:25, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Memory bandwidth graham.png
  • 14:25, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Zgesv MAGMA 2017 graham.png
  • 14:24, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Linear algebra on the GPU (content was: "This online tutorial covers the material contained in the online seminar given in October 2017. The recording is available [https://www.youtube.com/watch?v=7r..." (and the only contributor was "Ppomorsk"))
  • 14:21, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Command Line Fundamentals: Unix and Bash (content before blanking was: "==Basic UNIX concepts== *Unix is an operating system, all SHARCNET systems run some variant of Unix (eg. Linux) *Most Unix-based systems have a GUI interface, but the command line offers more complex and abstract interact...")
  • 14:21, 2 September 2021 Ppomorsk (Talk | contribs) deleted page GNU Parallel (content before blanking was: "GNU parallel is a shell tool which can be used for executing serial jobs in parallel within one compute node. It will be helpful if a user have many serial (also can be multi-threaded) jobs running in one whole-node job s...")
  • 14:20, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Serial farming on Graham (content before blanking was: "Watch this on youtube: https://www.youtube.com/watch?v=49dC4bmBCic = Introduction = == What is serial farming? == “Farming” is running a large number of cluster jobs which are effectively independent of each other bu...")
  • 14:20, 2 September 2021 Ppomorsk (Talk | contribs) deleted page META package for serial farming (content before blanking was: "=Overview= META package is a suite of scripts designed in-house to fully automate throughput computing (serial/parallel/GPU farming). They will work on National systems (Graham, Cedar etc), and other clusters which use th...")
  • 14:20, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Measuring Parallel Scaling Performance (content before blanking was: "<!--checked2015--> == Parallel Scalability == A common task in HPC is measuring the <i>scalability</i> (also referred to as the <i>scaling efficiency</i>) of an application. This measurement indicates how efficient an a...")
  • 14:20, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Parallel Debugging with DDT (content before blanking was: "=Overview of DDT= ==Introduction== The Distributed Debugging Tool (DDT) is a powerful commercial debugger with a graphical user interface (GUI). It’s main intended use is for debugging parallel MPI codes, though it c...")
  • 14:20, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Analyzing I/O Performance (content before blanking was: "{{template:LegacyPage}} __TOC__ === Introduction === You should read this knowledge base entry to learn how to best organize their files at SHARCNET. It is common to use...")
  • 14:20, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Signal Handling and Checkpointing (content before blanking was: "<!-- Checked 2019 Ed--> == An Overview of Signals == A significant aspect to how an operating system manages multitude asynchronous processes simultaneously is the notion of '''''signals'''''. Signals are the means by w...")
  • 14:20, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Getting an Account with SHARCNET (content before blanking was: "At this point a SHARCNET account is no longer required to access Compute Canada systems (including those managed by SHARCNET). These can be accessed using your Compute Canada username and password. You can apply for it...")
  • 14:19, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Attending SHARCNET Webinars (content before blanking was: "SHARCNET makes a number of seminar events available online (New User Webinar, general interest talks, etc.) using [https://zoom.us/ Zoom]. Zoom can be used by either installing an app (available for Windows, Mac, Linux et...")
  • 14:12, 2 September 2021 Ppomorsk (Talk | contribs) deleted page MATLAB (content was: "{{Template:CCDelete}} {{Software |package_name=MATLAB |package_description= MATLAB |package_idnumber=54 }} ==Introduction== For users at University of Waterloo(UW), Western University(UWO) and McMaster University, special provisions have...")
  • 14:10, 2 September 2021 Ppomorsk (Talk | contribs) deleted page GAUSSIAN (content was: "{{Template:CCDelete}} <!--checked2016--> {{Software |package_name=Gaussian |package_description=Chemistry, Electronic Structure Programs |package_idnumber=21 }} ==Introduction== Gaussian 03, 09 and 16 are available on several clusters,...")
  • 14:01, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Legacy Systems (content was: "Legacy systems are older systems which are about to be retired, or given a new set of software to make them similar to orca and graham. This page collects all information applicable to these systems. =Systems= Current legacy systems...")
  • 14:00, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Globus (content was: "{{Software |package_name=Globus |package_description=Compute Canada portal for fast, secure and reliable data transfer. |package_idnumber=184 }} '''Note''' - P..." (and the only contributor was "Jdesjard"))
  • 11:29, 2 September 2021 Ppomorsk (Talk | contribs) deleted page PNETCDF (content was: "{{Template:CCDelete}} {{Software |package_name=PNETCDF |package_description=A High Performance API for NetCDF File Access |package_idnumber=75 }} =Introduction= The Parallel-NetCDF library provides high-performance parallel I/O to/from...")
  • 11:29, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Dtn (content was: "{{System |cluster_name=dtn |target_usage=Data Transfer |system_idnumber=94 }} {{Template:LegacyPage}} The SHARCNET data transfer node (dtn.sharcnet.ca) is designed for high throughput access to Sharcnet filesystems without having to use...")
  • 11:28, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Cryptominisat (content was: "=4.5.3= Releases: https://github.com/msoos/cryptominisat/releases<br> ==Binary== wget https://github.com/msoos/cryptominisat/releases/download/4.5.3/cryptominisat4-elf-static-64b<br> chmod u+x cryptominisat4-elf-static-64b For com...")
  • 11:24, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Visualization of 2D and 3D datasets with ParaView (content was: "{{Template:GrahamUpdate}} == Scientific visualization with ParaView == For visualization of 2D and 3D data we highly recommend [http://www.paraview.org ParaVie..." (and the only contributor was "Razoumov"))
  • 11:24, 2 September 2021 Ppomorsk (Talk | contribs) deleted page PARAVIEW (content was: "{{Template:CCDelete}} {{Template:GrahamUpdate}} {{Software |package_name=PARAVIEW |package_description=An open-source, multi-platform data analysis and visualization application. |package_idnumber=67 }} <br> =Overview= Sharcnet provides...")
  • 11:23, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Visualization in SHARCNET (content was: "==Visualization Hardware And Software== We have a few high-end workstations dedicated for visualization uses, on which several commonly used visualization softw..." (and the only contributor was "Razoumov"))
  • 11:22, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Porting CUDA to OpenCL (content was: "<!--checked2016--> The data-parallel programming model in OpenCL shares some commonalities with CUDA programming model, making it relatively straightforward to conv..." (and the only contributor was "Feimao"))
  • 11:21, 2 September 2021 Ppomorsk (Talk | contribs) deleted page OPENCL (content was: "'''OpenCL''' is the first open standard for writing programs that can execute across heterogeneous platforms, most importantly both CPUs and GPUs. OpenCL includes a language (based on C) for writing ''kernels'' (functions which can be e...")
  • 11:19, 2 September 2021 Ppomorsk (Talk | contribs) deleted page SIESTA (content was: "{{Template:CCMissing}} ==Introduction== {{Software |package_name=SIESTA |package_description=Linear-scaling DFT based on Numerical Atomic Orbitals |package_idnumber=95 }} SIESTA performs self-consistent DFT employing order-N techniques...")
  • 11:18, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Using numactl (content was: "<!--checked2016--> '''numactl''' is a utility which can be used to control NUMA policy for processes or shared memory. NUMA (stands for Non-Uniform Memory Access) is a memory architecture in which a given CPU core has variable access sp...")
  • 11:16, 2 September 2021 Ppomorsk (Talk | contribs) deleted page CPMD (content was: "{{Template:CCMissing}} {{Software |package_name=CPMD |package_description=Parallelized Plane Wave Implementation of DFT |package_idnumber=61 }} =Introduction= Cpmd is provided so jobs can be run in the mpi queue on sharcnet clusters....")
  • 11:15, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Minsky (content was: "Minsky is an IBM S822LC server with dual power8+ chips, 10 cores per socket, 8 SMT (Simultaneous MultiThreading) per core. 4 NVIDIA Pascal P100 GPUs are connected with NVlinks. SSD is equipped as /scratch storage to provide 700GB usable...")
  • 11:14, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Kernel performance limiter 2.png
  • 11:14, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Instruction stall reasons.png
  • 11:14, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Occupancy.png
  • 11:14, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:SM utilization.png
  • 11:14, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Function unit utilization.png
  • 11:14, 2 September 2021 Ppomorsk (Talk | contribs) deleted page File:Kernel memory.png
  • 11:14, 2 September 2021 Ppomorsk (Talk | contribs) deleted page Profiling with Nsight (content was: "<!--checked2016--> {{Template:GrahamUpdate}} This page will give a brief introduction about how to use Nsight for profiling purpose. =Nsight Eclipse Edition= NVIDI..." (and the only contributor was "Feimao"))
  • 17:37, 19 February 2020 Ppomorsk (Talk | contribs) deleted page DIGITS (mosaic and copper retired so this page no longer needed)
  • 17:36, 19 February 2020 Ppomorsk (Talk | contribs) deleted page Torch (mosaic and copper retired so this page no longer needed)
  • 17:36, 19 February 2020 Ppomorsk (Talk | contribs) deleted page BIDMach (mosaic and copper retired so this page no longer needed)
  • 17:36, 19 February 2020 Ppomorsk (Talk | contribs) deleted page Caffe (mosaic and copper retired so this page no longer needed)
  • 17:35, 19 February 2020 Ppomorsk (Talk | contribs) deleted page Theano (mosaic and copper retired so this page no longer needed)
  • 17:35, 19 February 2020 Ppomorsk (Talk | contribs) deleted page Tensorflow (mosaic and copper retired so this page no longer needed)
  • 16:31, 21 November 2019 Ppomorsk (Talk | contribs) deleted page TEXLIVE (this page is old and obsolete)
  • 16:29, 21 November 2019 Ppomorsk (Talk | contribs) deleted page Handling Large Arrays (rather basic page, not really useful)
  • 13:39, 12 November 2019 Ppomorsk (Talk | contribs) restored page Globus (33 revisions restored)
  • 13:29, 8 November 2019 Syam (Talk | contribs) deleted page Computational Fluid Dynamics (content was: "=Introduction= This page is intended to serve as a community and information hub for our computational fluid dynamics users. It is our hope that users and staff whoever will be able to share tips and tricks, information about what thei...")
  • 13:29, 8 November 2019 Syam (Talk | contribs) deleted page OPENFOAM (content was: "{{Template:CCDelete}} {{Template:GrahamUpdate}} {{Software |package_name=OPENFOAM |package_description=open source CFD software package |package_idnumber=117 }} ==Introduction== OpenFOAM is a free, open source CFD software package prod...")
  • 12:45, 8 November 2019 Syam (Talk | contribs) deleted page Make utility and makefiles (content was: "{{Template:GrahamUpdate}} ===Overview=== The make utility reads a makefile containing instructions on how to compile and link your source files to produce an executable. You can write instructions in the makefile to test environment vari...")
  • 12:40, 8 November 2019 Syam (Talk | contribs) deleted page VISIT (content was: "{{Template:CCDelete}} {{Software |package_name=Visit |package_description=A free interactive parallel visualization and graphical analysis tool |package_idnumber=70 }} {{Template:LegacyPage}} =Introduction= VISIT is installed on select...")
  • 12:38, 8 November 2019 Syam (Talk | contribs) deleted page Serial / parallel farming (or throughput computing) (content was: "{{Template:LegacyPage}} =Introduction= ==Throughput computing / serial and parallel farming== ===Definitions=== Throughput computing is a method for solving computational problems in a short amount of time. The method involves decompos...")
  • 12:37, 8 November 2019 Syam (Talk | contribs) deleted page Machine Learning and Data Mining (content was: "=Introduction= This page is intended to serve as a community and information hub for our machine learning/deep learning and data mining users. __TOC__ =Hardwares= ==Graham== [https://docs.computecanada.ca/wiki/Graham GRAHAM] is a hete...")
  • 12:31, 8 November 2019 Syam (Talk | contribs) deleted page Common Bugs and Debugging with gdb (content was: "{{Template:GrahamUpdate}} == Overview == <p> This tutorial provides a concise explanation of frequently encountered bugs and how to use gdb to debug serial programs at SHARCNET. It is not comprehensive and only aims to give users enough...")
  • 12:20, 8 November 2019 Syam (Talk | contribs) deleted page Seminars and Workshops (content was: "===Summer School Archives=== * [http://www.sharcnet.ca/events/ss2015/ Summer School 2015]. * [http://www.sharcnet.ca/events/ss2014/ Summer School 2014]. * [http://ss2013.sharcnet.ca/ Summer School 2013]. * [http://ss2012.sharcnet.ca/ Su...")
  • 12:20, 8 November 2019 Syam (Talk | contribs) deleted page Serial code profiling using gprof (content was: "{{Template:LegacyPage}} <!--checked2015--> Serial code profiling is done for two main reasons: * To improve (sometimes dramatically) the efficiency of the serial code, or * As the important first step when converting a serial code to...")
  • 12:19, 8 November 2019 Syam (Talk | contribs) deleted page Programming (content was: "<!-- checked 2019 Ed --> == Programming == ===Serial Processing=== * Serial / parallel farming (or throughput computing) (self-directed tutorial) ===General Parallel Programming=== * Overview of HPC (s...")
  • 12:12, 8 November 2019 Syam (Talk | contribs) deleted page HDF (content was: "{{Template:CCDelete}} {{Software |package_name=HDF |package_description=Hierarchical Data Format |package_idnumber=48 }} =Introduction= The sharcnet HDF installation provides a serial and parallel build of HDF5. See the [http://www.hd...")
  • 12:02, 8 November 2019 Syam (Talk | contribs) deleted page Automating Tasks Using bash (content was: "== What is a shell? == User interfaces are the abstraction through which human beings interact with computers. We can partition the majority of user interfaces into two types: the '''graphical user interface'', which is familiar to mos...")
  • 11:55, 8 November 2019 Syam (Talk | contribs) deleted page Serial farming and Monte Carlo for SHARCNET (content was: "{{GrahamUpdate}} =What is serial farming, and who needs it?= Serial farming is solving a computational (research, engineering etc.) problem by running a bunch of serial jobs on a cluster. You need serial farming, if your problem belongs...")
  • 11:49, 8 November 2019 Syam (Talk | contribs) deleted page CUDA tips and tricks (content was: "<!--checked2015--> <!--checked2016--> = Overview = This page contains a collection of useful tips and tricks for CUDA GPU programmers. Everyone (users and staff) is welcome to add to and modify this wiki page. = Reduction = == Binary...")
  • 11:45, 8 November 2019 Syam (Talk | contribs) deleted page MAP (content was: "{{Template:CCDelete}} {{Software |package_name=MAP |package_description=MPI profiler |package_idnumber=145 }} {{NeedsGraphics}} =Graham instructions= DDT and MAP can now be used on our newest cluster, Graham. MAP doesn't require any...")
  • 11:28, 8 November 2019 Syam (Talk | contribs) deleted page K20 (content was: "'''This page is mostly outdated, as newer and more powerful Pascal GPUs are now available across Compute Canada (in Graham, Cedar etc.).''' = Availability = == SHARCNET == [https://www.sharcnet.ca/my/systems/show/106 Mosaic], 20 nodes,...")
  • 16:59, 6 November 2019 Ppomorsk (Talk | contribs) deleted page Globus (the page on CC wiki is better)
  • 16:44, 6 November 2019 Ppomorsk (Talk | contribs) deleted page CUDA (obsolete, page exists on CC wiki)
  • 15:55, 6 November 2019 Ppomorsk (Talk | contribs) deleted page ANSYS (dusky now repaved to graham image, so this page obsolete)
  • 15:54, 6 November 2019 Ppomorsk (Talk | contribs) deleted page STAR-CCM+ (dusky now repaved to graham image, so this page obsolete)
  • 15:53, 6 November 2019 Ppomorsk (Talk | contribs) deleted page COMSOL (dusky now repaved to graham image, so this page obsolete)
  • 15:53, 6 November 2019 Ppomorsk (Talk | contribs) deleted page ABAQUS (dusky now repaved to graham image, so this page obsolete)
  • 10:32, 15 October 2019 Ppomorsk (Talk | contribs) restored page New user seminar (10 revisions restored: requested by Sergey)
  • 16:13, 6 August 2019 Ppomorsk (Talk | contribs) deleted page Panda-qiime (content was: "{{Template:CCDelete}} =Qiime, PANDAseq & USearch= QIIME (canonically pronounced chime) stands for Quantitative Insights Into Microbial Ecology, is an open-source bioinformatics pipeline for performing microbiome analysis from raw DNA seq...")
  • 10:40, 30 July 2019 Ppomorsk (Talk | contribs) deleted page Using Subversion (content was: "==Overview== This page contains the basic information on how to use Subversion (SVN) for keeping track of your files of different versions during the courses of development. Every PI has a SVN repository at <pre> https://subversion.sha...")
  • 12:09, 26 May 2019 Ppomorsk (Talk | contribs) deleted page ORCA (page on CC wiki about this package already exists)
  • 12:37, 24 May 2019 Ppomorsk (Talk | contribs) deleted page Apache Spark (content was: "{{Delete|obsolete}}")
  • 12:43, 16 May 2019 Ppomorsk (Talk | contribs) deleted page New user seminar (content was: "The recorded new user seminar (only covers our legacy systems; not for Graham) is available at the following:<br> https://www.youtube.com/watch?v=p6QNVk8sSjM<br> <br> Register for an online seminar (which is primarily for Graham):<br> ht...")
  • 12:40, 16 May 2019 Ppomorsk (Talk | contribs) deleted page EMBOSS (content was: "{{Template:LegacyPage}} <!--checked2016--> In order to install EMBOSS in one's user environment on SHARCNet systems the package needs to be placed in the SHARCNet file systems, unpacked, installed and then user's PATH needs to be modifie...")
  • 12:35, 16 May 2019 Ppomorsk (Talk | contribs) deleted page GPU Accelerated Computing (content moved to "Legacy Systems")
  • 12:22, 16 May 2019 Ppomorsk (Talk | contribs) deleted page Domain Portals (content was: "==Domain portals== Here we provide some additional information for SHARCNET users from the following areas: * Machine Learning and Data Mining * Computational Fluid Dynamics")
  • 12:19, 16 May 2019 Ppomorsk (Talk | contribs) deleted page Using Storage (moved content to "Legacy Systems")
  • 13:46, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Specifying Resource Requirements (content was: "{{Template:GrahamUpdate}} Graph 1 : Memory request utilization on Orca in 2012 Image:orca_runtime.png|400px|thumbnail|right|alt=Runtime estimate vs...")
  • 13:43, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Chemistry and Biochemistry (content was: "#REDIRECT Chemistry, Biochemistry and Biophysics" (and the only contributor was "Jemmyhu"))
  • 13:43, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Using MATLAB (content was: "#redirectMATLAB")
  • 13:43, 15 May 2019 Ppomorsk (Talk | contribs) deleted page JDK (content was: "#REDIRECT OPENJDK" (and the only contributor was "Roberpj"))
  • 13:38, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Cloud (content was: "#REDIRECT Carpet" (and the only contributor was "Edward"))
  • 13:37, 15 May 2019 Ppomorsk (Talk | contribs) deleted page OpenStack (content was: "#REDIRECT Cloud" (and the only contributor was "Edward"))
  • 13:05, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Bioinformatics (content was: "<!--checked2016--> =Introduction= This page is intended to serve as a community and information hub for our bioinformatics users. It is our hope that interested users and staff share tips and tricks, information about what their groups...")
  • 13:05, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Chemistry, Biochemistry and Biophysics (content was: "{{Template:GrahamUpdate}} ==Introduction== This page is intended to serve as a community and information hub for our computational chemistry, biochemistry and bi..." (and the only contributor was "Jemmyhu"))
  • 13:05, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Astrophysics Portal (content was: "{{Template:GrahamUpdate}} =Introduction= This page is intended to serve as a community and information hub for our computational astrophysics users. It is our hope that users and staff who are astrophysics savvy will be able to share...")
  • 12:04, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Astrophysics/FLASH3 (content was: "{{Template:Outdated}} This page is for an old (circa 2011) project. ==FLASH3 project== On Saw FLASH2.5: /work/kirshdr/FLASH2.5/ FLASH3.3: /work/kirshdr/FLASH3.3/ == gas drag == 2.5/source/particles/active/short_range/ShortRangeFo...")
  • 12:34, 14 May 2019 Ppomorsk (Talk | contribs) deleted page Google Test (content was: "=Software Information= Google Test is Google's C++ test framework. * URL: https://github.com/google/googletest =Foreword= The following installation instructions are based on work done in [https://www.sharcnet.ca/my/problems/ticket/2...")
  • 12:33, 14 May 2019 Ppomorsk (Talk | contribs) deleted page QD (content was: "{{Software |package_name=QD |package_description=A package that supports a double-double datatype with about 32 decimal digits |package_idnumber=11 }} =Introduction= QD is a library supporting quadruple precision. SHARCNET provides this...")
  • 12:31, 14 May 2019 Ppomorsk (Talk | contribs) deleted page DDT (there is a DDT page on CC wiki with this content)
  • 12:30, 14 May 2019 Ppomorsk (Talk | contribs) deleted page ASE (content was: "= steps to install ASE in your own space = 1. Installation, take a look at how to use pip at Sharcnet https://www.sharcnet.ca/help/index.php/Python#Using_pip I..." (and the only contributor was "Jemmyhu"))
  • 12:30, 14 May 2019 Ppomorsk (Talk | contribs) deleted page DAR (content was: "{{Software |package_name=dar |package_description=A shell command to back up directory trees and files |package_idnumber=140 }} =Introduction= Dar is a shell command that backs up directory trees and files, taking care of hard links, E...")
  • 12:29, 14 May 2019 Ppomorsk (Talk | contribs) deleted page ARPACK-NG (content was: "{{Software |package_name=ARPACK-NG |package_description=a collection of Fortran77 subroutines to solve eigenvalue problems |package_idnumber=112 }} =Introduction= ARPACK is a collection of Fortran77 subroutines designed to solve large s...")
  • 12:28, 14 May 2019 Ppomorsk (Talk | contribs) deleted page BIOPERLRUN (content was: "{{Software |package_name=BIOPERLRUN |package_description=Provides a suite bioperlrun wrapper interface modules to various bioinformatics applications. |package_id..." (and the only contributor was "Roberpj"))
  • 12:25, 14 May 2019 Ppomorsk (Talk | contribs) deleted page AMICA (content was: "<big>'''AMICA''' is an "Code for AMICA: Adaptive Mixture ICA with shared components". (Page created & building steps tested by Paul Preney on Dec. 9, 2016.) ==Building AMICA on Graham== To build AMICA on Graham (tested Aug. 30, 2017):...")
  • 12:22, 14 May 2019 Ppomorsk (Talk | contribs) deleted page BIO-SAMTOOLS (content was: "{{Template:GrahamUpdate}} =1.38= Tested on orca running centos 6.4 by doug@sharcnet.ca on Jul29, 2013. Step 1) Prepare environment ... <pre> cd ~/ module purge all /bin/rm -rf .cpan perl5 (optional) export PERL5LIB=/home/$USER/perl5/li...")
  • 12:18, 14 May 2019 Ppomorsk (Talk | contribs) deleted page TopHat (content was: "<big>'''TopHat''' is a fast splice junction mapper for RNA-Seq reads. ==Tophat installation on new Compute Canada systems (cedar and graham)== wget https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz tar xvfz tophat-2.1...")
  • 12:17, 14 May 2019 Ppomorsk (Talk | contribs) deleted page PopAlu (content was: "{{Template:LegacyPage}} =Software Information= PopAlu is an open source C++ project: * URL: https://github.com/aimeida/PopAlu =Foreword= The following installation instructions are based on work done in [https://www.sharcnet.ca/my/pr...")
  • 11:50, 14 May 2019 Ppomorsk (Talk | contribs) deleted page LSPREPOST (content was: "{{Software |package_name=LSPREPOST |package_description=Pre and Post processor for ls-dyna. |package_idnumber=155 }} =Introduction= LS-PrePost is an advanced in..." (and the only contributor was "Roberpj"))
  • 11:47, 14 May 2019 Ppomorsk (Talk | contribs) deleted page SAMTOOLS (content was: "{{Software |package_name=SAMTOOLS |package_description=Sequence Alignment/Map generic format for storing large nucleotide sequence alignments. |package_idnumber=163 }} =Introduction= SAM (Sequence Alignment/Map) is a flexible generic fo...")
  • 16:33, 13 May 2019 Ppomorsk (Talk | contribs) deleted page VMD (content was: "{{Software |package_name=VMD |package_description=Program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scri..." (and the only contributor was "Roberpj"))
  • 16:32, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Dice (content was: "=0.9= * NOTE: The Dice web site is here: https://sanshar.github.io/Dice/ Tested on orca running centos 6.8 by preney@sharcnet.ca on June 6, 2017.<br> 1) Download Instructions <pre>cd $HOME mkdir build cd build # Download DICE: wget ht...")
  • 16:31, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Dedicated Programming Support Projects (content was: "#REDIRECT Code Repositories")
  • 16:30, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Ssh for Windows Users (content was: "#REDIRECTSSH#Windows" (and the only contributor was "Ppomorsk"))
  • 16:29, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Genome-wide Prediction of Mutant Single Nucleotide Polymorphisms based on Shannon Information Theory (moved to staff wiki)
  • 16:28, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Individual-based Model of Forest Dynamics to Study Global Ecological Change (moved to staff wiki)
  • 16:23, 13 May 2019 Ppomorsk (Talk | contribs) deleted page International summer school (content was: "[http://summerschool.niif.hu/ ISS 2014] - International Summer School 2014 June 01 to 06, 2014, Budapest SHARCNET attendee: Tyson Whitehead Other Compute Canada attendees: Jonathan Ferland = Talks = == Exascale == * good intro talk...")
  • 16:21, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Managing your files effectively at SHARCNET with SVN (content was: "#REDIRECT Webinar 2014 Managing your files effectively at SHARCNET with SVN" (and the only contributor was "Edward"))
  • 16:21, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Introduction for Linux Abstract (content was: "#REDIRECT Webinar 2013 Introduction for Linux Abstract" (and the only contributor was "Ppomorsk"))
  • 16:16, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Stock Prediction Using Recurrent Neural Network (content was: "#REDIRECT Webinar 2018 Stock Prediction Using Recurrent Neural Network" (and the only contributor was "Ppomorsk"))
  • 16:15, 13 May 2019 Ppomorsk (Talk | contribs) deleted page The Benefits of GLOST for Many Jobs (content was: "#REDIRECT Webinar 2018 The Benefits of GLOST for Many Jobs" (and the only contributor was "Ppomorsk"))
  • 16:12, 13 May 2019 Ppomorsk (Talk | contribs) deleted page All about job wait times in the Graham queue (content was: "#REDIRECT Webinar 2018 All about job wait times in the Graham queue" (and the only contributor was "Ppomorsk"))
  • 16:12, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Using Computational Chemistry software effectively on Graham (content was: "#REDIRECT Webinar 2018 Using Computational Chemistry software effectively on Graham" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Fundamentals of working at the command line at Graham (content was: "#REDIRECT Webinar 2018 Fundamentals of working at the command line at Graham" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Debugging on Graham with DDT (content was: "#REDIRECT Webinar 2018 Debugging on Graham with DDT" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Introduction to MySQL on Graham (content was: "#REDIRECT Webinar 2018 Introduction to MySQL on Graham" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Harnessing the Power of Heterogeneous Computing using Boost.Compute + OpenCL (content was: "#REDIRECT Webinar 2018 Harnessing the Power of Heterogeneous Computing using Boost.Compute + OpenCL" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Concurrent File I/O by Multiple Processes (content was: "#REDIRECT Webinar 2018 Concurrent File I/O by Multiple Processes" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Understand (and potentially reduce) job wait times (content was: "#REDIRECT Webinar 2018 Understand (and potentially reduce) job wait times" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Using MATLAB effectively on Graham and Cedar (content was: "#REDIRECT Webinar 2018 Using MATLAB effectively on Graham and Cedar" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MySQL Part 2: Relations and Joins (content was: "#REDIRECT Webinar 2018 MySQL Part 2: Relations and Joins" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Using Pseudorandom Number Sequences in C++ (content was: "#REDIRECT Webinar 2018 Using Pseudorandom Number Sequences in C++" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Code profiling on Graham (content was: "#REDIRECT Webinar 2018 Code profiling on Graham" (and the only contributor was "Ppomorsk"))
  • 16:04, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Dipping into C++17 Parallel Algorithms with Intel's Parallel STL (content was: "#REDIRECT Webinar 2019 Dipping into C++17 Parallel Algorithms with Intel's Parallel STL" (and the only contributor was "Ppomorsk"))
  • 16:04, 13 May 2019 Ppomorsk (Talk | contribs) deleted page The Monad Understanding Hurdle (content was: "#REDIRECT Webinar 2019 The Monad Understanding Hurdle" (and the only contributor was "Ppomorsk"))
  • 16:04, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Best practices on Graham (content was: "#REDIRECT Webinar 2019 Best practices on Graham" (and the only contributor was "Ppomorsk"))
  • 16:03, 13 May 2019 Ppomorsk (Talk | contribs) deleted page What Happened To My Job? (content was: "#REDIRECT Webinar 2019 What Happened To My Job?" (and the only contributor was "Ppomorsk"))
  • 16:03, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Introduction to parallel programming with MPI and Python (content was: "#REDIRECT Webinar 2019 Introduction to parallel programming with MPI and Python" (and the only contributor was "Ppomorsk"))
  • 16:03, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Exploring Octave package dataframe (content was: "#REDIRECT Webinar 2019 Exploring Octave package dataframe" (and the only contributor was "Ppomorsk"))
  • 16:03, 13 May 2019 Ppomorsk (Talk | contribs) deleted page PRE and POST production on Graham (content was: "#REDIRECT Webinar 2019 PRE and POST production on Graham" (and the only contributor was "Ppomorsk"))
  • 13:34, 13 May 2019 Ppomorsk (Talk | contribs) deleted page CONVERGE (content was: "{{Software |package_name=CONVERGE |package_description=CFD Code Using the AMR Mesh Generation Technique |package_idnumber=154 }} =Introduction= A converge module is made available on sharcnet to run large jobs in the mpi queue. =Versi...")
  • 13:33, 13 May 2019 Ppomorsk (Talk | contribs) deleted page CaMa-Flood (content was: "{{Template:GrahamUpdate}} The CaMa-Flood (Catchment-based Macro-scale Floodplain) model is designed to simulate the hydrodynamics in continental-scale rivers. ==CaMa-Flood v3.6.2 installation guide== To build this software on SHARCNET,...")
  • 13:33, 13 May 2019 Ppomorsk (Talk | contribs) deleted page CPAN (content was: "{{Template:LegacyPage}} {{Software |package_name=CPAN |package_description=The Comprehensive Perl Archive Network|package_idnumber=169 }} =Introduction= A meta module providing an updated version of the Cpan shell. =Version Selection=...")
  • 13:32, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Caret (content was: "=6.0.78= Below steps tested on orca running centos 6.9 by doug@sharcnet.ca on Feb 21, 2018.<br> <pre> ssh orca.sharcnet.ca [roberpj@orc-login1:~] ssh orc-dev3..." (and the only contributor was "Roberpj"))
  • 13:30, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Programming Xeon Phi (content was: " =The Architecture= Xeon Phi is the first Intel Many Integrated Core (MIC) architecture product that combines many Intel CPU cores onto a single chip. The Xeon Phi co-processor can be considered as an on-chip computing node which has 60(...")
  • 13:29, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Pyomo (content was: "== Introduction == Pyomo is a Python-based open-source software package that supports a diverse set of optimization capabilities for formulating, solving, and an..." (and the only contributor was "Jnandez"))
  • 13:29, 13 May 2019 Ppomorsk (Talk | contribs) deleted page NWCHEM (content was: "{{Software |package_name=NWCHEM |package_description=A computational chemistry package |package_idnumber=12 }} ==Introduction== NWChem is a computational chemistry package that is designed to run on high-performance parallel supercompute...")
  • 13:28, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MPFUN (content was: "{{Template:LegacyPage}} {{Software |package_name=MPFUN |package_description=A Fortran-90 arbitrary precision package |package_idnumber=16 }} ===Introduction=== MPFUN90 is a Fortran-90 arbitrary precision package (i.e. user specifies the...")
  • 13:28, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MODE (content was: "{{Template:LegacyPage}} {{Software |package_name=MODE |package_description=Lumerical MODE provides tools for guided and eigenmode expansion (EME) solver |package_idnumber=162 }} =Introduction= Provides mode software for use by research...")
  • 13:27, 13 May 2019 Ppomorsk (Talk | contribs) deleted page TRINITY (content was: "<!--checked2016--> {{Template:GrahamUpdate}} =2.0.6= This document provides test and build instructions for http://trinityrnaseq.github.io/ provided by doug@sharcnet.ca 17jun2015: 1) Demonstrate howto use the 'unsupported' sharcnet bui...")
  • 13:27, 13 May 2019 Ppomorsk (Talk | contribs) deleted page PETSC SLEPC (content was: "<!--checked2016--> {{Software |package_name=PETSC_SLEPC |package_description=A suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations |package_idnum...")
  • 13:26, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Pymol (content was: "{{GrahamUpdate}} ==Pymol on new Compute Canada systems (cedar and graham)== Pymol can be installed through Anaconda (see [https://docs.computecanada.ca/wiki/Anaconda/en Anaconda page] on docs.computecanada.ca for more details). First,...")
  • 13:25, 13 May 2019 Ppomorsk (Talk | contribs) deleted page PARI/GP (content was: "{{Software |package_name=PARI/GP |package_description=A computer algebra system designed for fast computations in number theory |package_idnumber=93 }} <b>Introduction</b> Please note PARI/GP is a package installed as part of the opera...")
  • 13:24, 13 May 2019 Ppomorsk (Talk | contribs) deleted page LLVM (content was: "{{Software |package_name=LLVM |package_description=The LLVM Compiler Project with Sub-Projects Clang,Openmp,Polly |package_idnumber=185 }} =Version Selection= <..." (and the only contributor was "Roberpj"))
  • 13:24, 13 May 2019 Ppomorsk (Talk | contribs) deleted page JULIA (content was: "{{Template:GrahamUpdate}} {{stub}} =versions and installation= ==0.6.2== The following two commands will (1) download the Julia binary from the website (julialang.org) as a tar file, and (2) extract the tar file. The target directory...")
  • 13:22, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Winsshfs (content was: "#REDIRECT SSHFS" (and the only contributor was "Edward"))
  • 13:22, 13 May 2019 Ppomorsk (Talk | contribs) deleted page YT (content was: "{{Template:GrahamUpdate}} {{Software |package_name=Yt |package_description=Visualization |package_idnumber=151 }} ==Introduction== The yt project is a Python package for analyzing and visualizing volumetric, multi-resolution astrophysic...")
  • 13:22, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Yambo (content was: "{{Template:GrahamUpdate}} Jemmy Hu, Oct. 18, 2016 Steps to build Yambo on Sharcnet 1) using the default the environment settings [jemmyhu@saw-login1:~/work/software/yambo/4.0.4] module list Currently Loaded Modulefiles: 1) torque/...")
  • 13:21, 13 May 2019 Ppomorsk (Talk | contribs) deleted page XCRYSDEN (content was: "{{Software |package_name=XCRYSDEN |package_description=Visualization software |package_idnumber=94 }} = XCrySDen on Cedar and Graham= On cedar and graham XCrySDen is installed as a module. To use it, connect with the graphical interfa...")
  • 13:20, 13 May 2019 Ppomorsk (Talk | contribs) deleted page SeqAn (content was: "{{Template:GrahamUpdate}} =Software Information= SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. * URL: http://www.seqan.de/ * Downloads:...")
  • 13:19, 13 May 2019 Ppomorsk (Talk | contribs) deleted page ILOGCPLEX (content was: "{{Template:GrahamUpdate}} {{Software |package_name=ILOGCPLEX |package_description=A component of IBM ILOG CPLEX Optimization Studio |package_idnumber=109 }} =Introduction= Users must join first the <i>ilogcplex</i> group before the sof...")
  • 12:38, 13 May 2019 Ppomorsk (Talk | contribs) deleted page OPENMPI (content was: "{{Software |package_name=OPENMPI |package_description=Implementation of MPI-1 and MPI-2 message passing standards |package_idnumber=5 }} =Compute Canada Clusters= The default module version of OpenMPI on cedar, graham and new-orca is v...")
  • 12:35, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Wise2/Genewise (content was: "This software is related to ticket 24610[https://www.sharcnet.ca/my/problems/ticket/24610] and ticket 25036[https://www.sharcnet.ca/my/problems/ticket/25036] To build wise2, you should start with unzipping the tar file, then the "glib-c...")
  • 12:35, 13 May 2019 Ppomorsk (Talk | contribs) deleted page YAML-CPP (content was: "{{LegacyPage}} =0.5.2= The following installation instructions are based on https://github.com/jbeder/yaml-cpp/blob/master/install.txt Apr27,2015 <doug@sharcnet.ca>: ===System Installs=== Both yamp-cpp and yamp-cpp-devel repository...")
  • 12:32, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Transposome (content was: "<!-- Checked 2019 Ed --> =Software Information= Transposome is a toolkit for annotation of transposable element families from unassembled sequence reads. * URL: http://sestaton.github.io/Transposome * Git: https://github.com/sestaton/T...")
  • 12:32, 13 May 2019 Ppomorsk (Talk | contribs) deleted page FSL (content was: "<!--checked2016--> == General Info == [http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/ FSL website] FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data. It runs on Apple and PCs (both Linux, and Windows via...")
  • 12:31, 13 May 2019 Ppomorsk (Talk | contribs) deleted page VASP (content was: "{{Template:GrahamUpdate}} <big>'''VASP''': The Vienna Ab initio Simulation Package (VASP) is a computer program for atomic scale materials modelling, e.g. electronic structure calculations and quantum-mechanical molecular dynamics, from...")
  • 12:29, 13 May 2019 Ppomorsk (Talk | contribs) deleted page NETCDF (content was: "{{GrahamUpdate}} {{Software |package_name=NETCDF |package_description=An interface for array-oriented data access and a library that provides an implementation of the interface |package_idnumber=18 }} =Introduction= Provides NetCDF for...")
  • 12:27, 13 May 2019 Ppomorsk (Talk | contribs) deleted page PARPACK (content was: "#REDIRECT ARPACK-NG" (and the only contributor was "Roberpj"))
  • 12:25, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MrBAYES (content was: "{{Software |package_name=MrBAYES |package_description=Bayesian estimation of phylogeny |package_idnumber=37 }} =Introduction= MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evoluti...")
  • 12:25, 13 May 2019 Ppomorsk (Talk | contribs) deleted page RLWRAP (content was: "{{Software |package_name=RLWRAP |package_description=A small utility that uses the GNU readline library |package_idnumber=124 }} =Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters cedar a...")
  • 12:24, 13 May 2019 Ppomorsk (Talk | contribs) deleted page GlimmerHMM (content was: "<!--checked2016--> =3.0.1= This document explains howto compile 64bit binaries for GlimmerHMM to run on sharcnet clusters. Provided by doug@sharcnet.ca 26jun201..." (and the only contributor was "Roberpj"))
  • 12:24, 13 May 2019 Ppomorsk (Talk | contribs) deleted page GAP (content was: "{{Software |package_name=GAP |package_description=System for computational discrete algebra. |package_idnumber=139 }} =Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters cedar and graham....")
  • 12:23, 13 May 2019 Ppomorsk (Talk | contribs) deleted page FFTW (content was: "{{Software |package_name=FFTW |package_description=library |package_idnumber=14 }} ==Introduction== FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and...")
  • 12:19, 13 May 2019 Ppomorsk (Talk | contribs) deleted page RUBY (content was: "{{Template:GrahamUpdate}} {{Software |package_name=RUBY |package_description=An open source programming language with a focus on simplicity and productivity |pack..." (and the only contributor was "Roberpj"))
  • 12:19, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MGLTOOLS (content was: "{{Software |package_name=MGLTOOLS |package_description=Visualization and analysis of molecular structures. |package_idnumber=176 }} =Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters ced...")
  • 12:19, 13 May 2019 Ppomorsk (Talk | contribs) deleted page LRS (content was: "{{Template:LegacyPage}} =060= * This wiki shows howto compile MPLRS following the source <i>readme</i> file. Posted by <doug@sharcnet.ca> 24sep2015. <pre> ssh iqaluk.sharcnet.ca module unload intel openmpi mkl module load intel/15.0.3...")
  • 16:30, 10 May 2019 Ppomorsk (Talk | contribs) restored page ABAQUS (325 revisions restored: turns out this is still needed on remaining legacy systems)
  • 12:23, 10 May 2019 Ppomorsk (Talk | contribs) deleted page Template:Ancient 27047 (content was: "{| cellpadding=5 style="border:4px solid #CD5C5C" |- bgcolor="#FFDAB9" | This page is flagged as an 'ancient wiki page' and is under review in ticket {{{1}}}. |} __..." (and the only contributor was "Edward"))
  • 16:42, 9 May 2019 Ppomorsk (Talk | contribs) deleted page NCBI/C++TOOLKIT (content was: "#REDIRECT NCBIC++TOOLKIT" (and the only contributor was "Roberpj"))
  • 16:40, 9 May 2019 Ppomorsk (Talk | contribs) deleted page LUMERICAL (content was: "#REDIRECT FDTD" (and the only contributor was "Roberpj"))
  • 16:40, 9 May 2019 Ppomorsk (Talk | contribs) deleted page LS-DYNA (content was: "#REDIRECT LSDYNA" (and the only contributor was "Roberpj"))
  • 16:39, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Usearch (content was: "#REDIRECT Panda-qiime {{GrahamUpdate}}")
  • 16:39, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Git (content was: "#REDIRECT GIT" (and the only contributor was "Tyson"))
  • 16:37, 9 May 2019 Ppomorsk (Talk | contribs) deleted page GIT (content was: "#REDIRECT Using Git" (and the only contributor was "Ppomorsk"))
  • 16:36, 9 May 2019 Ppomorsk (Talk | contribs) deleted page SUBVERSION (content was: "#REDIRECT Using Subversion" (and the only contributor was "Ppomorsk"))
  • 16:10, 9 May 2019 Ppomorsk (Talk | contribs) deleted page GNUPLOT (content was: "#REDIRECT Using gnuplot" (and the only contributor was "Ppomorsk"))
  • 16:02, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Using parallel I/O in SHARCNET (content was: "#REDIRECT Webinar 2015 Using parallel I/O in SHARCNET" (and the only contributor was "Edward"))
  • 16:01, 9 May 2019 Ppomorsk (Talk | contribs) deleted page ParaView (content was: "#REDIRECT Visualization of 2D and 3D datasets with ParaView" (and the only contributor was "Razoumov"))
  • 16:00, 9 May 2019 Ppomorsk (Talk | contribs) deleted page OpenFOAM (content was: "#REDIRECT OPENFOAM" (and the only contributor was "Roberpj"))
  • 15:56, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Sshfuse (content was: "#REDIRECT SSHFS" (and the only contributor was "Edward"))
  • 15:56, 9 May 2019 Ppomorsk (Talk | contribs) deleted page SPARK (content was: "#REDIRECT Apache Spark")
  • 15:54, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Deploying a web server. (content was: "#REDIRECT Deploying a web server" (and the only contributor was "Preney"))
  • 15:53, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Grass (content was: "{{Template:LegacyPage}} == Installing GRASS == This page describes GRASS installation on one of our visualization workstations. Choose GRASS installation directory export GRASSDIR=/work/username/grass Next download and compile PROJ4...")
  • 15:51, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Astrophysics (content was: "#REDIRECT Astrophysics Portal" (and the only contributor was "Tyson"))
  • 15:51, 9 May 2019 Ppomorsk (Talk | contribs) deleted page SHARCNET Astrophysics Portal (content was: "#REDIRECT Astrophysics" (and the only contributor was "Tyson"))
  • 15:49, 9 May 2019 Ppomorsk (Talk | contribs) deleted page PETSc SLEPc (content was: "#REDIRECT PETSC SLEPC" (and the only contributor was "Roberpj"))
  • 15:49, 9 May 2019 Ppomorsk (Talk | contribs) deleted page MrBayes (content was: "#REDIRECT MrBAYES")
  • 15:49, 9 May 2019 Ppomorsk (Talk | contribs) deleted page PANDAseq (content was: "#REDIRECT Panda-qiime" (and the only contributor was "Edward"))
  • 15:49, 9 May 2019 Ppomorsk (Talk | contribs) deleted page OpenCL (content was: "#REDIRECT OPENCL" (and the only contributor was "Roberpj"))
  • 15:48, 9 May 2019 Ppomorsk (Talk | contribs) deleted page OpenMPI (content was: "#REDIRECT OPENMPI" (and the only contributor was "Roberpj"))
  • 15:47, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Panda (content was: "#REDIRECT panda-qiime" (and the only contributor was "Edward"))
  • 15:47, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Qiime (content was: "#REDIRECT panda-qiime" (and the only contributor was "Edward"))
  • 15:47, 9 May 2019 Ppomorsk (Talk | contribs) deleted page SAMtools (content was: "#REDIRECT SAMTOOLS" (and the only contributor was "Roberpj"))
  • 15:46, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Signal Handling (content was: "#REDIRECT Signal Handling and Checkpointing" (and the only contributor was "Dbm"))
  • 15:46, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Remote X Connections to Sharcnet (content was: "#REDIRECT Remote Graphical Connections" (and the only contributor was "Tyson"))
  • 15:45, 9 May 2019 Ppomorsk (Talk | contribs) deleted page XCrySDen (content was: "#REDIRECT XCRYSDEN" (and the only contributor was "Roberpj"))
  • 15:44, 9 May 2019 Ppomorsk (Talk | contribs) deleted page VisIt (content was: "#REDIRECT VISIT" (and the only contributor was "Roberpj"))
  • 15:43, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Remote File Access (content was: "{{Template:GrahamUpdate}} Note: this is a placeholder under development File management between SHARCNET systems and user's personal storage has always presented certain challenges, depending on the individual user's level of sophistic...")
  • 15:42, 9 May 2019 Ppomorsk (Talk | contribs) deleted page NetCDF (content was: "#REDIRECT NETCDF" (and the only contributor was "Roberpj"))
  • 15:42, 9 May 2019 Ppomorsk (Talk | contribs) deleted page ILOG/CPLEX (content was: "#REDIRECT ILOGCPLEX" (and the only contributor was "Roberpj"))
  • 14:27, 9 May 2019 Ppomorsk (Talk | contribs) deleted page PERL (content was: "{{Delete}}")
  • 15:39, 8 May 2019 Fm (Talk | contribs) deleted page ITK (re-deleted after undelete test)
  • 15:37, 8 May 2019 Fm (Talk | contribs) restored page ITK (8 revisions restored: test undelete)
  • 13:56, 8 May 2019 Ppomorsk (Talk | contribs) deleted page Improving your Python programs with NumPy and SciPy (content was: "#REDIRECT Webinar 2018 Improving your Python programs with NumPy and SciPy" (and the only contributor was "Ppomorsk"))
  • 13:54, 8 May 2019 Ppomorsk (Talk | contribs) deleted page ITK (content was: "{{Template:LegacyPage}} Insight Segmentation and Registration Toolkit (http://www.itk.org) is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis. The steps below ou...")
  • 13:53, 8 May 2019 Ppomorsk (Talk | contribs) deleted page ABAQUS (content was: "{{Delete|obsolete}}")
  • 13:53, 8 May 2019 Ppomorsk (Talk | contribs) deleted page ABINIT (content was: "{{delete|obsolete}}")
  • 13:52, 8 May 2019 Ppomorsk (Talk | contribs) deleted page ADF/BAND (content was: "{{delete|obsolete}}")
  • 13:52, 8 May 2019 Ppomorsk (Talk | contribs) deleted page AMBER (content was: "{{delete|obsolete}}")
  • 12:55, 6 May 2019 Ppomorsk (Talk | contribs) deleted page VESTA (content was: "{{Delete|obsolete}}")
  • 12:55, 6 May 2019 Ppomorsk (Talk | contribs) deleted page Big Data (content was: "{{Delete|obsolete}}")
  • 12:54, 6 May 2019 Ppomorsk (Talk | contribs) deleted page MAX3D: Visualization of Reciprocal Space (content was: "{{Delete|obsolete}}")
  • 10:25, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Supported Software Usage Documentation (content was: "#REDIRECT Supported Software Documentation" (and the only contributor was "Merz"))
  • 10:24, 3 May 2019 Ppomorsk (Talk | contribs) deleted page SYSTEM (content was: "{{Software |package_name=SYSTEM |package_description=Updated select system packages compiled with the gcc system compiler |package_idnumber=188 }} =Introduction=..." (and the only contributor was "Roberpj"))
  • 10:21, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Web portal (content was: "#REDIRECT Wiki tips and hints")
  • 10:18, 3 May 2019 Ppomorsk (Talk | contribs) deleted page OpenSees (content was: "'''OpenSees''' (Open System for Earthquake Engineering Simulation) is a software framework for simulating the seismic response of structural and geotechnical systems. It has advanced capabilities for modeling and analyzing the nonlinea...")
  • 10:15, 3 May 2019 Ppomorsk (Talk | contribs) deleted page OpenACC (content was: "{{Software |package_name=OpenACC |package_description=OpenACC - standard for parallel computing on heterogeneous systems (with GPGPUs) |package_idnumber= }} OpenACC is a programming standard for parallel computing, designed to simplify...")
  • 10:14, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Software (content was: "==Software== * Configuring your software environment with Modules * Supported Software Documentation (usage information for SHARCNET supported software) * Unsupported Software Documentation (documentation for unsupported soft...")
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Supported Software Documentation (content was: "{{Template:LegacyPage}} SHARCNET provides official support, including installing and maintaining the software, for a limited number of supported software packages. In addition, we also provide documentation that we and our user communit...")
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page HDFVIEW (content was: "{{Software |package_name=HDFVIEW |package_description=Visual Tool for Browsing and Editing HDF4 and HDF5 files. |package_idnumber=134 }} =Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters...")
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page JALVIEW (content was: "{{Software |package_name=JALVIEW |package_description=Bioinformatic visualization package |package_idnumber=174 }} =Introduction= Provides a manual binary insta..." (and the only contributor was "Roberpj"))
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page EMACS (content was: "{{Software |package_name=EMACS |package_description=Text editor and much much more. |package_idnumber=175 }} =Introduction= The sharcnet module provides a newer..." (and the only contributor was "Roberpj"))
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Bowtie2 (content was: " <big>'''Bowtie 2''' is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. ==Using Bowtie2 on Graham== Bowtie2 is installed as a module on Graham. <pre> module load bowtie2 </pre> After l...")
  • 10:12, 3 May 2019 Ppomorsk (Talk | contribs) deleted page GEOS (content was: "{{stub}} == General Info == GEOS http://trac.osgeo.org/geos/ was installed as a dependency for http://cran.r-project.org/web/packages/indicspecies/index.html == Version 3.4.2 == Version 3.4.2 was available on vdi-fedora20.user.sharcn...")
  • 10:12, 3 May 2019 Ppomorsk (Talk | contribs) deleted page GDB (content was: "{{Software |package_name=GDB |package_description=GDB https://www.gnu.org/software/gdb/ for debugging C, C++, Objective-C, Pascal and many more languages. |packag..." (and the only contributor was "Roberpj"))
  • 10:12, 3 May 2019 Ppomorsk (Talk | contribs) deleted page R (content was: "{{Software |package_name=R |package_description=a language and environment for statistical computing and graphics |package_idnumber=8 }} The documentation for using R on Compute Canada systems is available [https://docs.computecanada.ca...")
  • 10:11, 3 May 2019 Ppomorsk (Talk | contribs) deleted page NINJA (content was: "{{Software |package_name=NINJA |package_description=A small build system with a focus on speed. |package_idnumber=186 }} =Version Selection= <pre>module load ni..." (and the only contributor was "Roberpj"))
  • 10:11, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Using R and MPI (content was: " See documentation on [https://docs.computecanada.ca/wiki/R#Exploiting_parallelism_in_R Compute Canada Wiki]. The obsolete information previously on this page is available in the history of this article.")
  • 10:11, 3 May 2019 Ppomorsk (Talk | contribs) deleted page LAMMPS (content was: "{{Software |package_name=LAMMPS |package_description=Large-scale Atomic/Molecular Massively Parallel Simulator |package_idnumber=63 }} Up to date information about running LAMMPS is available on [https://docs.computecanada.ca/wiki/LAMMP...")
  • 10:10, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Hardware (content was: "==Hardware== * Hardware/System Resources (online reference of all documented systems) <!--* Current wait time distribution on core systems--> * NVIDIA K20/K80 GPU")
  • 10:10, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Scientific Computing (content was: "==Scientific Computing== * Solving Systems of Sparse Linear Equations (self-directed tutorial) * Using BLAS (LAPACK) routines with QD precision (62 digits). * LAPACK and ScaLAPACK Examples * INTERPRETERS vs COMPILERS *...")
  • 10:08, 3 May 2019 Ppomorsk (Talk | contribs) deleted page CuDNN (content was: "<big>'''cuDNN''' is an NVIDIA library with functionality used by deep neural network. It provides optimized versions of some operations like the convolution. cuDNN..." (and the only contributor was "Feimao"))
  • 10:08, 3 May 2019 Ppomorsk (Talk | contribs) deleted page OPENCV (content was: "{{Software |package_name=OPENCV |package_description=library of programming functions for real time computer vision |package_idnumber=135 }} =Introduction= The sharcnet openm module provides an uptodate version (compared to the version...")
  • 10:07, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Parallel Languages (content was: "=Haskell= Haskell is a mature, lazy, pure, functional language. These features can be summarized as follows * lazy - a value is not computed until needed, * pure - the output of a function is purely determined by its inputs, and * fu...")
  • 10:07, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Rmpi (content was: "If you have successfully built Rmpi and would like to share your findings with other sharcnet users enter the version number, system name, compilation instructions, build date and if you want to your username. <!--checked2015-->")
  • 10:06, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Globus / Gridftp (content was: "=Introduction= Globus is a method of copying large amounts of data securely and with a good speed between different servers/clusters, using browser-based interface. It is in active use in WestGrid and other consortia. It is using Gridft...")
  • 10:06, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Gaussian on SHARCNET systems (content was: "Please see [https://www.sharcnet.ca/my/software/show/21 Gaussian Software Page] <!--checked2015-->" (and the only contributor was "Jemmyhu"))
  • 10:05, 3 May 2019 Ppomorsk (Talk | contribs) deleted page KERAS (content was: "Documentation for KERAS is available at [https://docs.computecanada.ca/wiki/Keras Compute Canada wiki]. =NIX= Tested on COPPER running centos 6.9 by tyson@sharcnet.ca on Aug 1, 2018")
  • 10:04, 3 May 2019 Ppomorsk (Talk | contribs) deleted page GDL (content was: "Please refer to the GDL website for reference documentation ... http://gnudatalanguage.sourceforge.net/ <!--checked2015-->")
  • 10:04, 3 May 2019 Ppomorsk (Talk | contribs) deleted page RMPI (content was: "{{Software |package_name=RMPI |package_description=A package for R, a free software environment for statistical computing and graphics |package_idnumber=15 }} We do not provide an installation of Rmpi as part of the R installation....")
  • 10:03, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Using BLAS (LAPACK) routines with QD precision (62 digits). (content was: "#REDIRECT Using BLAS (LAPACK) routines with QD precision (62 digits)" (and the only contributor was "Ppomorsk"))
  • 10:03, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Scilab (content was: "#REDIRECT SCILAB" (and the only contributor was "Roberpj"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page PYTHON (content was: "#REDIRECTPython" (and the only contributor was "Ppomorsk"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Cloud Storage (content was: "#REDIRECT OwnCloud" (and the only contributor was "Edward"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page ImageMagick (content was: "#REDIRECT IMAGEMAGICK" (and the only contributor was "Roberpj"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Goblin (general compute cluster) (content was: "#REDIRECT Goblin" (and the only contributor was "Ppomorsk"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Reviews of Selected Development Stage Languages (content was: "#REDIRECT Development Stage Software Reviews" (and the only contributor was "Roberpj"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Clufflinks (content was: "#REDIRECT Cufflinks")
  • 16:15, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Portland (content was: "#REDIRECT PORTLAND" (and the only contributor was "Roberpj"))
  • 16:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Configuring your software environment with Modules (content was: "===Graham and Cedar=== The information presented below is for our legacy systems (Orca etc). The new Compute Canada national data centers, Graham and Cedar, use a somewhat different setup. Check the following link for details: https://d...")
  • 16:08, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Visualization Workstations (content was: "{{Template:GrahamUpdate}} ==About== ===Summary=== SHARCNET has a number of visualization workstations installed at particular partner institutions. Please see the [https://www.sharcnet.ca/my/systems Visualization Systems] list in the we...")
  • 16:07, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Monitoring Jobs (content was: "{{Template:LegacyPage}} This page provides useful information for monitoring and acquiring information about jobs that are scheduled, running or have finished running at SHARCNET. This could include finding the nodes the job is running...")
  • 16:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Dropbox (content was: "#REDIRECT OwnCloud {{LegacyPage}}")
  • 16:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page BLCR (content was: "{{Template:LegacyPage}} {{Software |package_name=BLCR |package_description=Application for checkpointing and restarting jobs |package_idnumber=74 }} =Introduction= Blcr is available for checkpointing and restarting serial or threaded jo...")
  • 16:05, 2 May 2019 Ppomorsk (Talk | contribs) deleted page UTIL (content was: "{{Template:LegacyPage}} {{Software |package_name=UTIL |package_description=A collection of tools for SHARCNET systems |package_idnumber=111 }} ==Overview== The util package is module loadable. To load util, use command: <pre> module l...")
  • 16:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page BIOSAMTOOLS (content was: "{{Ancient|27401}} {{Software |package_name=BIOSAMTOOLS |package_description=Perl interface to the libbam library for indexed and unindexed SAM/BAM sequence alignment databases. |package_idnumber=150 }} =Introduction= Provides the biosam...")
  • 16:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page FHI-AIMS (content was: "{{Ancient|27407}} ==INTRODUCTION== FHI-AIMS is accessible to members of the <i>ihamlito</i> sharcnet group sponsored by Dr.Hamilton from WLU. Before using the..." (and the only contributor was "Roberpj"))
  • 16:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Development Stage Software Reviews (content was: "{{Template:LegacyPage}} {{Ancient|27047}} This wiki page provides a editable list of development stage software not currently installed on sharcnet. A template structure is provided for adding information by staff and regular users ali...")
  • 16:02, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Pathscale (content was: "#REDIRECT PATHSCALE" (and the only contributor was "Roberpj"))
  • 16:01, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Owncloud (content was: "#REDIRECT OwnCloud" (and the only contributor was "Edward"))
  • 16:01, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MPC (content was: "{{Software |package_name=MPC |package_description=C library for the arithmetic of complex numbers with arbitrarily high precision and correct rounding of the result. |package_idnumber=148 }} =Introduction= The mpc sharcnet modules rov...")
  • 16:01, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Locally installed software (content was: "#REDIRECT Software Resources" (and the only contributor was "Merz"))
  • 15:59, 2 May 2019 Ppomorsk (Talk | contribs) deleted page IMSL (content was: "{{Template:LegacyPage}} {{Software |package_name=IMSL |package_description=Numerical Libraries |package_idnumber=53 }} ==Instruction for Release 5.0== <font color="red"> Please note, due to the lack of support for the specific compiler...")
  • 15:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GRACE (content was: "{{Software |package_name=GRACE |package_description=A 2D plotting tool descended from xmgr |package_idnumber=182 }} =Introduction= Provides GRACE on sharcnets f..." (and the only contributor was "Roberpj"))
  • 15:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GHC (content was: "{{Software |package_name=GHC |package_description= |package_idnumber=173 }} =Introduction= The sharcnet module provides the Glasgow Haskell Compiler GHC compile..." (and the only contributor was "Roberpj"))
  • 15:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GMP (content was: "{{Software |package_name=GMP |package_description=A portable library written in C for arbitrary precision arithmetic |package_idnumber=19 }} =GMP on new Compute Canada clusters (cedar and graham)= GMP has not yet been installed on ceda...")
  • 15:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page FIREFLY (content was: "{{Template:GrahamUpdate}} {{Software |package_name=FIREFLY |package_description=PC GAMESS/Firefly |package_idnumber=91 }} ==Introduction== The PC GAMESS/Firefly is an ab initio and DFT computational chemistry program developed to offer h...")
  • 15:56, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CP2K (content was: "{{Software |package_name=CP2K |package_description=Atomistic and Molecular Simulations of Solid State, Liquid, Molecular and Biological Systems |package_idnumber=161 }} <br> '''Note''' - if you are looking for '''potential''' and '''basi...")
  • 15:56, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CDF (content was: "{{Template:GrahamUpdate}} {{Software |package_name=CDF |package_description= Self-describing data format for the storage and manipulation of scalar and multidimensional data |package_idnumber=51 }} =Introduction= Scientific data manage...")
  • 15:55, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Cufflinks (content was: "{{Template:LegacyPage}} =2.1.1= Installed and tested on orca running centos 6.? by jemmyhu@sharcnet.ca on Apr24, 2013.<br> Downloaded cufflinks-2.1.1 from http://cufflinks.cbcb.umd.edu the Linux-64 binary version. [roberpj@orc-login2:/...")
  • 15:55, 2 May 2019 Ppomorsk (Talk | contribs) deleted page COREUTILS (content was: "{{Template:GrahamUpdate}} {{Software |package_name=COREUTILS |package_description= A set of basic GNU tools commonly used in shell scripts. |package_idnumber=143 }} =Introduction= This module provides a more recent version of the coreu...")
  • 15:55, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Cat (content was: "#REDIRECT CAT" (and the only contributor was "Isaac"))
  • 15:55, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CAT (content was: "{{LegacyPage}} {{System |cluster_name=cat |target_usage=General, emphasizing serial |system_idnumber=10 }} ==System Overview== {| class="wikitable" style="text-align:center" border="1" |- | CPU Model || Intel Xeon @ 2.4 GHz |- | Cores/n...")
  • 15:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page BitKinex (content was: "#REDIRECT WebDAV#Using a third party application (Windows)" (and the only contributor was "Edward"))
  • 15:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CMAKE (content was: "{{Software |package_name=CMAKE |package_description=Tools designed to build, test and package software |package_idnumber=122 }} For up to date information on CMAKE, go to [https://docs.computecanada.ca/wiki/CMake Compute Canada wiki].")
  • 15:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CHARM++ (content was: "{{Template:LegacyPage}} {{Software |package_name=CHARM++ |package_description=library |package_idnumber=40 }} ==Introduction== Charm++ is a parallel object-oriented programming language based on C++ and developed in the Parallel Programm...")
  • 15:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Copper (content was: "{{System |cluster_name=copper |target_usage=threaded/mpi jobs, GPU jobs, large memory jobs |system_idnumber=108 }} == Hardware == * nodes 1 - 8 ** 16 CPU cores (Dual Intel Xeon E5-2630 v3 @ 2.4 GHz) ** 4 NVIDIA Tesla K80 GPU cards (8 Ke...")
  • 15:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Wobbie (content was: "{{System |cluster_name=wobbie |target_usage=General purpose |system_idnumber=29 }} ==Usage== Wobbie is a contributed cluster. Jobs from non-contributors are normal (i.e. not required to be short) but the contributor group sometimes ask...")
  • 11:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MONO (content was: "{{Template:GrahamUpdate}} {{Software |package_name=MONO |package_description=Runtime implementation of the ECMA Common Language Infrastructure. |package_idnumber..." (and the only contributor was "Roberpj"))
  • 11:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MERCURIAL (content was: "{{Software |package_name=MERCURIAL |package_description=Source control management tool |package_idnumber=102 }} =Introduction= Mercurial is a free, distributed source control management tool. It offers you the power to efficiently handl...")
  • 11:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MPFR (content was: "<!--checked2016--> {{Software |package_name=MPFR |package_description=To provide a library for multiple-precision floating-point computation |package_idnumber=76 }} =MPFR on new Compute Canada clusters (cedar and graham)= MPFR has not...")
  • 11:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MOLDEN (content was: "{{Software |package_name=MOLDEN |package_description=A pre- and post processing program of molecular and electronic structure |package_idnumber=144 }} =Usage= Molden is available on vdi-centos6, or viz10-uwo, viz11-uwo, module load the...")
  • 11:12, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MEEP (content was: "{{Template:LegacyPage}} ==MEEP== ticket-17704 Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems http://ab-initio.mit.edu/wiki/index.php/Meep It...")
  • 11:11, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Getting Started with MPI (content was: "== Foreward == If you would prefer to see videos and slides introducing MPI, SHARCNET has made available online General Interest webinars which are linked at the bottom of this page in the #Comments and Further Reading section. ==...")
  • 11:11, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Getting Started with SHARCNET (content was: "{{Template:GrahamUpdate}} <!--checked2016--> ==What is SHARCNET?== SHARCNET is a consortium of Canadian academic institutions who share a network of high performance..." (and the only contributor was "Isaac"))
  • 11:11, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Using Subversion (content was: "== Why Version Control == It is common that one has several versions of the same code that evolves constantly during the course of development. Quite often most people will be versioning their files manually with numbers indicating diff...")
  • 11:08, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Parallel Java: Using MPJ Express on SHARCNET (content was: "{{Template:Outdated}} {{Template:LegacyPage}} ''Note: users should consult with one of SHARCNET's HPTC Software Analysts prior to engaging in HPC development with Java;..." (and the only contributor was "Dbm"))
  • 11:08, 2 May 2019 Ppomorsk (Talk | contribs) deleted page FPGA Accelerated Computing (content was: "{{Template:Outdated}} __TOC__ <span style="color:red">'''Note''': the system that provided this functionality (School) has since been decommissioned. We've left this information here for posteriety but at present there are no systems...")
  • 11:07, 2 May 2019 Ppomorsk (Talk | contribs) deleted page WebDAV (content was: "{{Template:GrahamUpdate}} {{Template:Outdated}} =WebDAV : Web Distributed Authoring and Versioning= The WebDAV protocol is a framework which allows a user to create, move, and delete documents on a remote server. SHARCNet now provides a...")
  • 11:07, 2 May 2019 Ppomorsk (Talk | contribs) deleted page ACML (content was: "{{Software |package_name=ACML |package_description=The AMD Core Math Library including lapack, blasé, fft |package_idnumber=4 }} '''NOTE: ACML is no longer maintained and should not be used. This page is kept for archival purposes onl...")
  • 11:07, 2 May 2019 Ppomorsk (Talk | contribs) deleted page SUPERLU (content was: "{{Template:Outdated}} {{Software |package_name=SUPERLU |package_description=Library for direct solution of large, sparse, nonsymmetric linear equation systems. |p..." (and the only contributor was "Roberpj"))
  • 11:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page ISAACS (content was: "{{Template:Outdated}} ==Compiling isaacs-2.5== Here are the steps to compile ISAACS on a visualization workstation: export IDIR=/work/razoumov/20641 # select installation directory cd $IDIR wget http://sourceforge.net/projects/isa...")
  • 11:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page SCILAB (content was: "{{Template:LegacyPage}} {{Template:Outdated}} {{Software |package_name=Scilab |package_description=A scientific software package for numerical computations |package_idnumber=68 }} =Version Selection= This section is not applicable pers...")
  • 11:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Astrophysics/FLASH (content was: "{{Template:Outdated}} Local SHARCNET page for the astrophysical numerical code FLASH. ==Compilation tricks== *In the FLASH version commonly used in SHARCNET (v.20050218) there is an annoying bug preventing smooth compilation of the co...")
  • 11:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page OpenMP Reduction for User Defined Data Types (content was: "== <center>OpenMP Reduction for User Defined Data Types </center>== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc@sharcnet.ca'''</center> <ce..." (and the only contributor was "Nickc"))
  • 11:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Using BLAS (LAPACK) routines with QD precision (62 digits) (content was: "{{Template:GrahamUpdate}} ===<center> Using BLAS (LAPACK) routines with QD precision </center> === <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail:..." (and the only contributor was "Nickc"))
  • 11:05, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MPI Reduction for User Defined Data Types (content was: "== <center>MPI Reduction for User Defined Data Types </center>== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc@sharcnet.ca'''</center> <cente..." (and the only contributor was "Nickc"))
  • 11:05, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Solving Systems of Sparse Linear Equations (content was: "===<center>System of Linear Equations</center>=== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' (former SHARCNET staff)'''</center> __TOC__ A system of linear equations is best represented by using the matrix notation: :''...")
  • 11:05, 2 May 2019 Ppomorsk (Talk | contribs) deleted page INTERPRETERS vs COMPILERS (content was: "{{Template:Outdated}} ==<center>INTERPRETERS vs COMPILERS </center>== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc@sharcnet.ca'''</center> <..." (and the only contributor was "Nickc"))
  • 11:05, 2 May 2019 Ppomorsk (Talk | contribs) deleted page EIGENVALUES OF NON-SYMMETRIC MATRICES (content was: "<!--checked2016--> {{Template:Outdated}} == <center>EIGENVALUES OF NON-SYMMETRIC MATRICES </center>== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail:..." (and the only contributor was "Nickc"))
  • 11:05, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Eigenproblem solved with PETSc SLEPc (content was: "<!--checked2016--> {{Template:Outdated}} == <center>Eigenproblem solved with PETSc_SLEPc </center>== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc@sharcnet.ca'''</center> <center>'''HPC Consultant - SHARCNET'''...")
  • 11:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page NAG LAPACK "extras" library (content was: "{{Template:Outdated}} ==<center>NAG LAPACK "extras" library </center>== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc@sharcnet.ca'''</center> <center>'''HPC Consultant - SHARCNET''' '''http://www.sharcnet.ca '...")
  • 11:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Complete FFTW Examples in C F90 OCTAVE and PETSc (content was: "{{Template:Outdated}} == <center>Complete FFTW Examples in C, F90, OCTAVE and PETSc </center>== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc@sharcnet.ca'''</center> <center>'''HPC Consultant - SHARCNET''' '''h...")
  • 11:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Advanced SBVP Example in C, F90, OCTAVE and PETSc (content was: "<!--checked2016--> {{Template:Outdated}} == <center>ADVANCED SBVP Example in C, F90, OCTAVE and PETSc </center>== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc@sharcnet.ca'''</center> <center>'''HPC Consultant -...")
  • 11:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Analytical Computation (content was: "<!--checked2016--> {{Template:Outdated}} ===<center>Defining Analytical Computation</center>=== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc..." (and the only contributor was "Nickc"))
  • 11:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page RUNGE-KUTTA Tutorial (content was: "{{Template:Outdated}} ===<center> RUNGE-KUTTA for ORDINARY DIFFERENTIAL EQUATIONS </center>=== <center>'''Nick Chepurniy, Ph.D.'''</center> <center>''' e-mail: nickc@..." (and the only contributor was "Nickc"))
  • 11:03, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Digital Humanities (content was: "{{Template:Outdated}} = Introduction = This page is intended to serve as a community and information hub for our digital humanities users. It is our hope that interested users and staff share tips and tricks, information about what th...")
  • 11:03, 2 May 2019 Ppomorsk (Talk | contribs) deleted page A Big Bridge: High Performance Computing and the Humanities (content was: "{{Template:Outdated}} This is the abstract of a paper to be presented at the 2008 Congress of the Humanities and Social Sciences Authors: * Geoffrey Rockwell - Associate Professor, Department of Communication Studies and Multimedia, M...")
  • 11:03, 2 May 2019 Ppomorsk (Talk | contribs) deleted page ATLAS (content was: "<!--checked2016--> {{Template:Outdated}} {{Software |package_name=ATLAS |package_description=Automatically Tuned Linear Algebra Software |package_idnumber=3 }} <b><font color=red>IMPORTANT NOTICE:</font> ATLAS will removed from all SHAR...")
  • 11:03, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GSL (content was: "{{Template:GrahamUpdate}} <!--checked2016--> {{Template:Outdated}} {{Software |package_name=GSL |package_description=Mathematical routines to C/C++ programmers |package_idnumber=31 }} ==Examples== ===Example 1: Random Numbers from a Po...")
  • 11:02, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MPICH2 (content was: "<!--checked2016--> {{Template:Outdated}} {{Software |package_name=MPICH2 |package_description=To provide an MPI implementation |package_idnumber=52 }} Mpich2 is not installed on sharcnet please use openmpi instead. <br> <br> <b>Legacy Us...")
  • 11:02, 2 May 2019 Ppomorsk (Talk | contribs) deleted page SPAI (content was: "{{Template:Outdated}} [http://www.computational.unibas.ch/software/spai/spaidoc.html SPAI – SParse Approximate Inverse Preconditioner] (MPI) Warning: the above link is dead. You can still find the source file (v.3.2) in my home direc...")
  • 11:01, 2 May 2019 Ppomorsk (Talk | contribs) deleted page TORQUE (content was: "{{Software |package_name=TORQUE |package_description=Resource manager for SHARCNET clusters |package_idnumber=92 }} <b><U>NATIVE TORQUE COMMANDS (all T&M clusters)</..." (and the only contributor was "Isaac"))
  • 10:59, 2 May 2019 Ppomorsk (Talk | contribs) deleted page IPM (content was: "{{Template:GrahamUpdate}} {{Software |package_name=IPM |package_description=Profiling library for parallel codes |package_idnumber=125 }} =Introduction= IPM (Integrated Performance Monitoring) is a portable profiling infrastructure for...")
  • 10:59, 2 May 2019 Ppomorsk (Talk | contribs) deleted page PATHSCALE (content was: "{{Template:LegacyPage}} {{Software |package_name=Pathscale |package_description=the Pathscale Compiler Suite |package_idnumber=44 }} =Introduction= Pathscale is a compiler. Presently SHARCNET provides version 4 of the compiler. It u...")
  • 10:59, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Quantifying the Importance of Horizontal Gene Transfer for Bacterial Genome Evolution (content was: "This project was conducted in the first round of SHARCNET's dedicated programming support competition. It mainly concerned developing a program that reads in the sequences of all genes present o...")
  • 10:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page ROOT (content was: "{{Template:Outdated}} ===about=== [http://root.cern.ch/drupal/ ROOT] ''The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way.'' ===instal...")
  • 10:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Unsupported Software Documentation (content was: "#REDIRECT Unsupported Software" (and the only contributor was "Roberpj"))
  • 10:57, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Software Resources (content was: "#REDIRECT Unsupported Software Documentation" (and the only contributor was "Merz"))
  • 10:56, 2 May 2019 Ppomorsk (Talk | contribs) deleted page UCSC Kent Utilities (content was: "{{Template:LegacyPage}} ==Overview== The "UCSC Kent Utilities" is a collection of utilities for performing genomics and related work that was used to build the web based [http://genome.ucsc.edu/cgi-bin/hgTracks?org=human UCSC Genome Bro...")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MAFFT (content was: "{{Template:Outdated}} {{Template:LegacyPage}} '''Update November 2014''': These instructions were written for the older SHARCNET environment. It should be possible to build MAFFT for the present SHARCNET environment without any deviati...")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page LinBox (content was: "{{Template:Outdated}} {{Template:GrahamUpdate}} '''Update November 2014''': These instructions are from 2010 and were created for the SHARCNET environment at that time. It should be possible to install this software on the newer operat...")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page KmerGenie (content was: "=kmergenie-1.6741= Built successfully on orca under centos6.4 using the system GCC, see [https://www.sharcnet.ca/my/problems/ticket/23952 ticket 23952]. ssh orca.sharcnet.ca wget http://kmergenie.bx.psu.edu/kmergenie-1.6741.tar.gz t...")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Vi and vim configuration (content was: "This page is now included in the SHARCNET Vim Documentation page at: VIM#Configuration <!--checked2015-->")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page VIM (content was: "{{Software |package_name=VIM |package_description=Text editor |package_idnumber=100 }} =Introduction= The vim console text editor can be started by typing <i>vim</i>. A graphical version is also available on most Sharcnet systems: <...")
  • 10:53, 2 May 2019 Ppomorsk (Talk | contribs) deleted page OwnCloud (content was: "{{LegacyPage}} <div class="alert-info" style="margin-bottom: 10pt"> <div style="float:left; vertical-align:top; text-align: center; font-weight:bold; font-size: 3em; color: white; background-color: red; height: 0.8em; width: 1.2em; pad...")
  • 10:53, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Enzo (content was: "{{Template:Outdated}} =Introduction= Enzo is a parallel adaptive mesh refinement (AMR) grid-based code for simulating structure formation in the Universe. It..." (and the only contributor was "Razoumov"))
  • 10:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page HOOMD-blue (content was: "'''HOOMD-blue''' is a general-purpose particle simulation toolkit. It scales from a single CPU core to thousands of GPUs. =Install from git= Tested on Compute Canada cluster "graham" November 2017 by <ppomorsk@sharcnet.ca> <br> modul...")
  • 10:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page BINUTILS (content was: "{{Template:Outdated}} {{Software |package_name=BINUTILS |package_description=A collection of programming tools for the manipulation of object code |package_idnumber=114 }} =Intrduction= To load the most recent binutils module do: <pre...")
  • 10:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page COMPILE (content was: "<!--checked2016--> {{Template:Outdated}} {{Software |package_name=COMPILE |package_description=Provide "wrappers" that permit generic compilation |package_idnumber=129 }} compile is loaded by default in the SHARCNET user-environment/1.0...")
  • 10:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Cutadapt (content was: "{{template:LegacyPage}} read more about this package here: https://cutadapt.readthedocs.org/en/stable/ To install on kraken in my home directory I'd do: ssh kraken.sharcnet.ca module load python wget http://cutadapt.googlecode.com...")
  • 10:51, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GRAPHVIZ (content was: "{{Template:GrahamUpdate}} {{Template:Outdated}} {{Software |package_name=GRAPHVIZ |package_description=Graph visualization software |package_idnumber=98 }} =Version Selection= Please refer to the documentation [http://www.graphviz.org/...")
  • 10:51, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Geneious (content was: "{{Template:LegacyPage}} This software was test installed for a group on the SHARCNET vdi-centos6 host in March 2015. There is a trial license which was not configured at the time. Please email help@sharcnet.ca if you need help setting...")
  • 10:50, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Glossary of Terms (content was: "{{Ancient|27402}} ===Barrier=== A synchronization point in parallel code where two or more threads must both reach before continuing. ===IDE=== Integrated Develop..." (and the only contributor was "Edward"))
  • 10:50, 2 May 2019 Ppomorsk (Talk | contribs) deleted page LDWRAPPER (content was: "{{LegacyPage}} <!--checked2016--> {{Software |package_name=LDWRAPPER |package_description=Wrapper for the sharcnet default centos6 module environment to ensure LD_RUN_PATH is used. |package_idnumber=165 }} =Introduction= The ldwrappe...")
  • 10:50, 2 May 2019 Ppomorsk (Talk | contribs) deleted page NCL (content was: "{{Template:GrahamUpdate}} {{Software |package_name=NCL |package_description=Visualization and analysis of molecular structures. |package_idnumber=183 }} =Introduction= Provides installation of NCL scripts from operating system reposit...")
  • 10:49, 2 May 2019 Ppomorsk (Talk | contribs) deleted page NOTEBOOK (content was: "This page has been superceeded by https://www.sharcnet.ca/help/index.php/JUPYTER" (and the only contributor was "Roberpj"))
  • 10:47, 2 May 2019 Ppomorsk (Talk | contribs) deleted page PORTLAND (content was: "#REDIRECT PGI" (and the only contributor was "Roberpj"))
  • 10:46, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Singular (content was: "{{Template:GrahamUpdate}} New instructions (December 2015) for orca, for git version of Singular module unload intel openmpi mkl module load gmp mpfr gcc cd /work/$USER mkdir SINGULAR cd SINGULAR wget http://www.mathematik.uni-k...")
  • 10:46, 2 May 2019 Ppomorsk (Talk | contribs) deleted page PyCUDA (content was: "<big>'''PyCUDA''' makes it possible to easily use CUDA inside Python code.</big> Documentation can be found on the [http://mathema.tician.de/software/pycuda pa..." (and the only contributor was "Ppomorsk"))
  • 10:46, 2 May 2019 Ppomorsk (Talk | contribs) deleted page PyOpenCL (content was: "<big>'''PyOpenCL''' makes it possible to easily use OpenCL inside Python code.</big> Documentation can be found on the [http://mathema.tician.de/software/pyopencl package webpage]. This package is not currently installed as SHARCNET-su...")
  • 10:44, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Unsupported Software (content was: "{{Template:LegacyPage}} =Unsupported Software= Package listed on this page are NOT included on the Officially [https://www.sharcnet.ca/my/software Supported] Sharcnet software page. __TOC__ ==User-Installed Packages== This table prov...")
  • 10:44, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Trilinos (content was: "{{Template:Outdated}} ==Newest instructions (August 2013, problem ticket https://www.sharcnet.ca/my/problems/ticket/21268 )== * orca, Centos 6.4, default compiler (inte..." (and the only contributor was "Syam"))
  • 10:43, 2 May 2019 Ppomorsk (Talk | contribs) deleted page UMFPACK (content was: "{{stub}}<br> Instruction to build UMFPACK have been given in 'README_Jemmy' file under /work/jemmyhu/software/umfpack/install_packages")
  • 10:43, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Transition to CentOS 6 (content was: "{{LegacyPage}} As of September 2013 most SHARCNET core, speciality and contributed systems that were running CentOS 5 have been upgraded to CentOS 6. As part of this upgrade we reorganized the default software environment and provide...")
  • 10:43, 2 May 2019 Ppomorsk (Talk | contribs) deleted page WIEN2K (content was: "<!--checked2016--> {{Template:Outdated}} {{Template:LegacyPage}} {{Software |package_name=WIEN2K |package_description=DFT simulation |package_license= Not free, users must purchase license |package_url=www.wien2k.at |package_idnumber= |...")
  • 10:42, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GAMESS US (content was: "==Run instruction for Gamess_US on bull for serial jobs only == 1) create a subdirectory gamess_scr in your /scratch directory cd /scratch/youid mkdir gamess_scr 2) for first time user, add the path to your .bash_profile file you...")
  • 10:42, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GCC (content was: "{{Template:GrahamUpdate}} {{Software |package_name=GCC |package_description=GNU compiler collection |package_idnumber=20 }} =Introduction= '''GCC''' is a free, open-source, very widely used compiler. While at SHARCNET it is usually best...")
  • 10:42, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GNU (content was: "{{Software |package_name=GNU |package_description=Selected packages from the GNU project |package_idnumber=136 }} =Introduction= Sharcnet installs commonly used GNU packages from http://www.gnu.org/software/#allgnupkgs. =Version Selec...")
  • 10:41, 2 May 2019 Ppomorsk (Talk | contribs) deleted page IMAGEMAGICK (content was: "<!--checked2016--> {{Template:Outdated}} {{Software |package_name=IMAGE MAGICK |package_description=Suite for the creation, modification and display of bitmap images |package_idnumber=119 }} <u>COMMANDS</u> <b>convert</b> between imag...")
  • 10:40, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Iqaluk (content was: "{{System |cluster_name=iqaluk |target_usage=Large, tightly-coupled threaded jobs |system_idnumber=93 }} ==System Overview== {| class="wikitable" style="text-align:center" border="1" |- | Node Range || 1 |- | CPU Model || Intel Xeon X750...")
  • 10:39, 2 May 2019 Ppomorsk (Talk | contribs) deleted page PGI (content was: "{{GrahamUpdate}} {{Software |package_name=PGI |package_description=the Portland Group Compiler suite |package_idnumber=46 }} =Overview= '''Portland Group''' produces high-quality compilers that include certain unusual features, such as...")
  • 10:39, 2 May 2019 Ppomorsk (Talk | contribs) deleted page SLURM (content was: "'''SLURM''' (Simple Linux Utility for Resource Management) is a job scheduler. On SHARCNET it is currently in use on clusters: Graham, Copper, and Mosaic. (On Copper and Mosaic, users can use our legacy command ''sqsub'' to submit jobs...")
  • 10:39, 2 May 2019 Ppomorsk (Talk | contribs) deleted page SPRNG (content was: "{{Software |package_name=SPRNG |package_description=To develop, implement and test a scalable package for parallel pseudo random number generation |package_idnumber=50 }} If you are on a <b>cluster with modular install</b> (most of our c...")
  • 10:38, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Summer School preview (content was: "From May 28th to June 1st SHARCNET will run its annual Summer School on Advanced Research Computing, this time at Western University. This summer school will be our lar..." (and the only contributor was "Syam"))
  • 10:38, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Sunrise (content was: "{{Template:Outdated}} {{Template:LegacyPage}} 16-01-17 Many of the links on this page are dead, it this page will not be updated. '''Warning:''' This is an old page created by a staff who is no longer with SHARCNET. As re-testing of al...")
  • 10:38, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Storage systems (content was: "For information about storage, see the [https://docs.computecanada.ca/wiki/Storage_and_file_management/en Storage and file management page] on Compute Canada documentation wiki. Category:Systems")
  • 10:37, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Sqsub (content was: "{{LegacyPage}} ---- '''NAME''' sqsub - submit a job ---- '''SYNOPSIS''' sqsub [-r|W runtimelimit] [-o ofile] [-e efile] [-i ifile] [-t or --test] [-q queue] [-f flag] [-n ncpus] [-N nnodes] [--ppn processes-per-node] [--tpp t...")
  • 10:37, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Sqjobs (content was: "{{Template:LegacyPage}} ---- '''NAME''' sqjobs - show jobs ---- '''SYNOPSIS''' sqjobs [-a|--all][-u user] [-q][-r][-z][-d][--queue queuename][--command command-substring] [-l][-L] [-n][-s|--summary][--sort...")
  • 10:37, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Sqkill (content was: "{{Template:GrahamUpdate}} ---- '''NAME''' sqkill/suspend/resume - kill, suspend or resume jobs in scheduler. ---- '''SYNOPSIS''' sqkill [-a|--all][-r|--running][-q|--queued] jobid... sqsuspend jobid... sqresume jobid... Ex...")
  • 10:37, 2 May 2019 Ppomorsk (Talk | contribs) deleted page SQ (content was: "{{Template:LegacyPage}} {{Software |package_name=SQ |package_description=A set of generic tools for submitting and managing jobs on SHARCNET clusters. |package_idnumber=130 }} =Introduction= To submit a job, certain basic information...")
  • 10:36, 2 May 2019 Ppomorsk (Talk | contribs) deleted page OPEN64 (content was: "{{Template:LegacyPage}} {{Software |package_name=Open64 |package_description= the open64 compiler suite |package_idnumber=81 }} =Introduction= Provides a free compiler alternative on sharcnet systems with openmpi support. =Version Sel...")
  • 10:36, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Mosaic (content was: "{{System |cluster_name=mosaic |target_usage=serial and/or small threaded/mpi jobs, GPU jobs |system_idnumber=106 }} == Hardware == * nodes 1 - 20 ** 20 CPU cores ** one NVIDIA Tesla K20m GPU (Compute capability: 3.5) ** memory: 256.0...")
  • 10:36, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Getting Started with Compiling Code on SHARCNET (content was: "<!--checked2016--> {{Template:GrahamUpdate}} == Objective == The purpose of this guide is to give a quick step-by-step introduction to compiling and running code on SHARCNET clusters. Specifically, we will go through the steps necessary...")
  • 10:35, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Orca (content was: "'''NOTE''' - Orca has been decommissioned on March 29, 2019. Only the login node will remain accessible for a few weeks afterwards so that users can migrate their data out of /scratch. Data in /home and /work will be accessible from oth...")
  • 10:35, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Monk (content was: "The monk cluster has been retired at the end of March, 2019. {{System |cluster_name=monk |target_usage=GPU jobs |system_idnumber=82 }} Category:Systems Decommissioned")
  • 10:34, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Goblin (content was: "{{System |cluster_name=goblin |target_usage=General purpose |system_idnumber=5 }} ==System Overview== {| class="wikitable" style="text-align:center" border="1" |- | Node Range || 1-15 || 16-20 || 21-36 || 37-48 || 49 || 50 || 51-54 |-...")
  • 10:34, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Graham (content was: "300px 300px 250px '''IMPORTANT''': to login to Graham, you have to use your Compute Canada credentials (login name and password), not your SHARCNET credentials! Graham is...")
  • 10:33, 2 May 2019 Ppomorsk (Talk | contribs) deleted page FEniCS (content was: "The FEniCS Project is a collection of free software with an extensive list of features for automated, efficient solution of differential equations. Link: http://fenicsproject.org/ At present SHARCNET helps users install this package in...")
  • 10:32, 2 May 2019 Ppomorsk (Talk | contribs) deleted page TINKER (content was: "{{Software |package_name=TINKER |package_description=Software Tools for Molecular Design |package_idnumber=147 }} =Introduction= Provides a multi-threaded build of the tinker package with the intel compiler. =Version Selection= <pre>...")
  • 10:29, 2 May 2019 Ppomorsk (Talk | contribs) deleted page SIMPSON (content was: "=Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters cedar and graham. If that should be required, please email help@sharcnet.ca.")
  • 10:29, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Python (content was: "{{Software |package_name=Python |package_description=Powerful Dynamic Programming Language (includes mpi4py and numpy) |package_idnumber=108 }} For information on how to use Python on Compute Canada systems, please go to [https://docs....")
  • 10:28, 2 May 2019 Ppomorsk (Talk | contribs) deleted page NAMD (content was: "{{Software |package_name=NAMD |package_description=Parallel Molecular Dynamics Program |package_idnumber=41 }} Please see the [https://docs.computecanada.ca/wiki/NAMD documentation page on Compute Canada wiki]")
  • 10:28, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GROMACS (content was: "{{Software |package_name=GROMACS |package_description=Molecular Dynamics for Biomolecular Systems |package_idnumber=13 }} Please see the [https://docs.computecanada.ca/wiki/GROMACS page on Compute Canada wiki]")
  • 10:26, 2 May 2019 Ppomorsk (Talk | contribs) deleted page DLPOLY (content was: "{{Software |package_name=DLPOLY |package_description=Suite of programs that allow users to carry out molecular dynamics simulations |package_idnumber=73 }} For documentation, consult the [https://docs.computecanada.ca/wiki/DL_POLY DL POL...")
  • 11:33, 24 April 2019 Ppomorsk (Talk | contribs) deleted page Gulf (content was: "#REDIRECT Storage systems")
  • 11:32, 24 April 2019 Ppomorsk (Talk | contribs) deleted page Archive (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
  • 11:32, 23 April 2019 Ppomorsk (Talk | contribs) deleted page OPT (content was: "<!--checked2016--> OPT is an outdated package and is no longer installed in SHARCNET. It was superceded by a much better profiler [https://www.sharcnet.ca/my/software/show/145 MAP].")
  • 11:27, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Mako (content was: "{{LegacyPage}} <!--checked2015--> <!--checked2016--> {{System |cluster_name=mako |target_usage= |system_idnumber=39 }} Category:Systems ==System overview== This cluster is installed at the University of Guelph. The login node c...")
  • 11:27, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Guppy (content was: "{{System |cluster_name=guppy |target_usage=serial and/or small threaded/mpi jobs |system_idnumber=70 }} ===About=== Guppy is a contributed system, which means that the contributors have priority access to the system. Note that contri...")
  • 11:25, 23 April 2019 Ppomorsk (Talk | contribs) deleted page ListOfSystem (content was: "{{Template:LegacyPage}} =Systems= {| border="1" cellpadding="2" cellspacing="0" ! style="background:#8AA8E5;" | Specialty Systems ! style="background:#ECCF98;" | Target Utilization |- |kraken |compute cluster |- |Orca |orc...")
  • 11:23, 23 April 2019 Ppomorsk (Talk | contribs) deleted page School (FPGA system) (content was: "#REDIRECT School {{LegacyPage}}" (and the only contributor was "Ppomorsk"))
  • 11:23, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Hound (large memory/fat node cluster) (content was: "#REDIRECT Hound")
  • 11:22, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Hardware/System Resources (content was: "{{Delete|obsolete}} This page provides documentation for all of SHARCNET's computational resources. This includes both hardware specifications as well as specialized usage information as appropriate, and links to information in the web...")
  • 11:22, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Systems (content was: "{{Ancient|27402}} {{Template:LegacyPage}} This page explains the terms on the web portal [https://www.sharcnet.ca/my/systems Systems] page. Which system should I use? ==Core Systems== These are SHARCNET'...")
  • 11:21, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Tembo (content was: "{{System |cluster_name=tembo |target_usage=serial and/or threaded jobs |system_idnumber=?? }} {{LegacyPage}} ===About=== Tembo is a contributed system, which means that the contributors have priority access to the system. Note that c...")
  • 11:18, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Requin new (content was: "{{System |cluster_name=requin |target_usage=Large, tightly-coupled MPI jobs |system_idnumber=17 }} ==System Overview== {| class="wikitable" style="text-align:left" border="1" ! Spec !! Info !! Remarks |- | Cores (CPU)|| AMD Opteron 2.6G...")
  • 11:17, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Requin (content was: "{{System |cluster_name=requin |target_usage=Large, tightly-coupled MPI jobs |system_idnumber=17 }} ==System Overview== {| class="wikitable" style="text-align:left" border="1" ! Spec !! Info !! Remarks |- | Cores (CPU)|| AMD Opteron 2.6G...")
  • 11:17, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Redfin (content was: "{{System |cluster_name=redfin |target_usage=General purpose with a focus on large-memory parallel applications |system_idnumber=75 }} ==System Overview== {| class="wikitable" style="text-align:center" border="1" |- | Node Range || 1-14...")
  • 11:16, 23 April 2019 Ppomorsk (Talk | contribs) deleted page HP-MPI (content was: "<!--checked2016--> {{Template:Outdated}} {{Software |package_name=HP-MPI |package_description=HP's MPI implementation that was included with XC |package_idnumber=103 }} On systems with HP-MPI, you just "sqsub -q mpi" or "-f mpi" - the MP...")
  • 11:15, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Wobbe (content was: "{{LegacyPage}} {{System |cluster_name=wobbie |target_usage=General 64 bit cluster emphasizing MPI |system_idnumber=29 }} ==System overview== Wobbe was decommissioned. Category:Systems Decommissioned <!--checked2015-->")
  • 11:15, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Gulper (content was: "{{System |cluster_name=gulper |target_usage=see below |system_idnumber=20 }} This cluster was decommissioned in 2013. ==General information== '''''gulper.sharcnet.ca''''' is a Myrinet cluster with 27 nodes. *each node contains 2 cpus...")
  • 11:14, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Tope (content was: "{{System |cluster_name=tope |target_usage=utility cluster |system_idnumber=36 }} == tope.sharcnet.ca == Tope was decommissioned on Nov 06 2013. Tope was originally a 4-GPU [http://www.nvidia.com/object/tesla_gpu_server.html NVIDIA Tesl...")
  • 11:14, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Rainbow (content was: "{{LegacyPage}} {{System |cluster_name=rainbow |target_usage=visualization |system_idnumber=30 }} The machine is decommissioned. Category:Systems Decommissioned <!--checked2016-->")
  • 11:14, 23 April 2019 Ppomorsk (Talk | contribs) deleted page PoPs (content was: "{{LegacyPage}} <!--checked2015--> '''NOTE:''' circa 2010 the PoPs have been amalgamated into kraken '''''bala.sharcnet.ca''''' '''''bruce.sharcnet.ca''''' '''''dolphin.sharcnet.ca''''' '''''kraken.sharcnet.ca''''' '''''megaladon.sh...")
  • 11:14, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Angel (content was: "{{System |cluster_name=angel |target_usage=GPU jobs, 4 hour time limit on other jobs |system_idnumber=38 }} '''Note''' - Angel has been retired and is no longer available. Information on this page kept for archiving reasons only. ==S...")
  • 11:14, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Silky (content was: "{{LegacyPage}} {{System |cluster_name=silky |target_usage=large memory, MPI and threaded jobs |system_idnumber=15 }} '''NOTE - silky cluster has been retired and is no longer available.''' ==System overview== Silky was SHARCNET's larg...")
  • 11:14, 23 April 2019 Ppomorsk (Talk | contribs) deleted page School (content was: "{{LegacyPage}} {{System |cluster_name=school |target_usage=RASC (reconfigurable application specific computing) system |system_idnumber=31 }} '''Note:''' School was decommissioned in April 2013, to be used as spare equipment for [https:...")
  • 11:13, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Bull (content was: "<!--checked2015--> '''''bull.sharcnet.ca''''' was a quadrics cluster with 96 nodes. NOTE: It has been amalgamated into the kraken cluster. At present the nodes are only connected by gigabit ethernet as the quadrics network is inop...")
  • 11:13, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Leopard (experimental cluster) (content was: "<!--checked2015--> '''''leopard.sharcnet.ca''''' was a gigabit ethernet cluster with 34 nodes. *leopard consists of 2 cores (Xeon, 8GB mem), 8 cores (Xeon, 2GB mem), 4 cores (Opteron @ 2.59 GHz, 2GB mem), 4 cores (Opteron @ 1.8 G...")
  • 11:13, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Kraken (content was: "{{LegacyPage}} {{System |cluster_name=kraken |target_usage=serial and/or small threaded jobs |system_idnumber=69 }} ==System Overview== <big>'''Please Note'''</big>: Kraken is primarily intended to run serial or small threaded progra...")
  • 11:13, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Whale (content was: "'''NOTE:''' whale was decommissioned Apr 09 2012 at 10:18AM . It's hardware was replaced with an expansion to the Orca cluster at the University of Waterloo through an energy savings program. Whale served the majority of SHARCNET's...")
  • 11:13, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Hound (content was: "{{LegacyPage}} {{System |cluster_name=hound |target_usage= medium-size threaded jobs (up to 32-way), <br> large memory jobs (serial/threaded/mpi) (up to 128GB/process) |system_idnumber=42 }} ==System Overview== Hound is a heterogenous s...")
  • 11:12, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Saw (content was: "{{System |cluster_name=saw |target_usage=Low latency parallel jobs <br> Using multiples of 8 processes is optimal |system_idnumber=41 }} ==System Overview== {| class="wikitable" style="text-align:left" border="1" ! Spec !! Info !! Remar...")
  • 11:12, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Bramble old (content was: "{{LegacyPage}} {{System |cluster_name=bramble |target_usage=large memory, threaded and MPI jobs |system_idnumber=37 }} ==System overview== NOTE: "Bramble has suffered a hardware failure and is no longer available." https://www.sharcne...")
  • 11:12, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Brown (content was: "{{System |cluster_name=brown |target_usage=serial and/or small threaded/mpi jobs |system_idnumber=44 }} ==System Overview== {| class="wikitable" style="text-align:center" border="1" |- | Node Range || 1-80 || 81-94 || 95-114 || 115-116...")
  • 11:12, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Prism (content was: "{{System |cluster_name=prism |target_usage=Shared memory visualization applications. |system_idnumber=32 }} Category:Systems Decommissioned")
  • 11:12, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Prickly (content was: "{{Template:Outdated}} {{System |cluster_name=prickly |target_usage=CELL cluster |system_idnumber=43 }} ==Pickly was decommissioned as of June 2012.== ==General information== This is a heterogeneous cluster comprised of 4 x86_64 multic...")
  • 11:11, 23 April 2019 Ppomorsk (Talk | contribs) deleted page Narwhal (content was: "<!--checked2015--> '''''narwhal.sharcnet.ca''''' was a Myrinet cluster with total 267 nodes. NOTE: Narwhal is decommissioned. *each node contains 4 cpus, providing over 1068 cores *each node contains 8 GB per node (> 2TB memory) *con...")
  • 12:06, 22 April 2019 Ppomorsk (Talk | contribs) deleted page KRONECKER PRODUCT (ScaLAPACK,OCTAVE,F90) (content was: "{{Delete|obsolete}}")
  • 12:06, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Java Threads SS15 (content was: "{{Delete|obsolete}}" (and the only contributor was "Edward"))
  • 12:06, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Profiling MPI codes with Allinea's MAP (content was: "{{Template:Delete}} Recently SHARCNET acquired a powerful MPI profiler made by Allinea - MAP. It now comes bundled up with their other popular product, parallel debugger DDT, and is installed on our cluster orca. This tutorial will give...")
  • 12:05, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Seminar Abstracts (content was: "{{Template:Delete}}")
  • 11:58, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Megamouth (content was: "#REDIRECT Storage systems")
  • 11:58, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Lundun (content was: "#REDIRECT Storage systems")
  • 11:58, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Nar-home (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
  • 11:57, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Jones.guelph.sharcnet (content was: "#REDIRECT Storage systems" (and the only contributor was "Afrepues"))
  • 11:57, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Jones-home (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
  • 11:57, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Cove.uwo.sharcnet (content was: "#REDIRECT Storage systems" (and the only contributor was "Afrepues"))
  • 11:57, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Davy-home (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
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  • 11:56, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Blue (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
  • 11:56, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Bull-home (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
  • 11:56, 22 April 2019 Ppomorsk (Talk | contribs) deleted page GlobalC (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
  • 11:56, 22 April 2019 Ppomorsk (Talk | contribs) deleted page GlobalB (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
  • 11:56, 22 April 2019 Ppomorsk (Talk | contribs) deleted page GlobalA (content was: "#REDIRECT Storage systems" (and the only contributor was "Isaac"))
  • 11:55, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Kraken new (content was: "#REDIRECT Kraken")
  • 11:55, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Home.narwhal.sharcnet (content was: "#REDIRECT Storage systems" (and the only contributor was "Afrepues"))
  • 11:55, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Home.bull.sharcnet (content was: "#REDIRECT Storage systems" (and the only contributor was "Afrepues"))
  • 11:54, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Gulper (experimental cluster) (content was: "#REDIRECTGulper")
  • 11:54, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Rainbow (visualization cluster) (content was: "#REDIRECT Rainbow {{LegacyPage}}" (and the only contributor was "Ppomorsk"))
  • 11:54, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Saw (large MPI capacity cluster) (content was: "#REDIRECT Saw" (and the only contributor was "John"))
  • 11:54, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Silky (SMP system) (content was: "#REDIRECTSilky")
  • 11:53, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Talk:WIEN2k (content was: "#REDIRECT Talk:WIEN2K" (and the only contributor was "Roberpj"))
  • 11:53, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Whale (throughput cluster) (content was: "#REDIRECT Whale" (and the only contributor was "John"))
  • 11:53, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Talk:Toward Exascale Simulations of 3D Radiative Transfer for Cloudy Atmospheres (content was: "#REDIRECT User talk:Ppomorsk/Toward Exascale Simulations of 3D Radiative Transfer for Cloudy Atmospheres" (and the only contributor was "Ppomorsk"))
  • 11:52, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Using the Mako Teaching Cluster (content was: "#REDIRECT Mako {{LegacyPage}}")
  • 11:52, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Prickly (CELL cluster) (content was: "#REDIRECTPrickly")
  • 11:51, 22 April 2019 Ppomorsk (Talk | contribs) deleted page New user semiar (content was: "#REDIRECT http://vidyoreplay.computecanada.ca/replay/showRecordingExternal.html?key=YzA0Pm5MlHpa2eJ" (and the only contributor was "Edward"))
  • 11:51, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Minksy (content was: "{{Delete|obsolete}}" (and the only contributor was "Feimao"))
  • 11:50, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Http://vidyoreplay.computecanada.ca/replay/showRecordingExternal.html?key=YzA0Pm5MlHpa2eJ (content was: "{| cellpadding=5 style="border:4px solid #CD5C5C" |- bgcolor="#FFDAB9" | This page to be deleted. |} __TOC__")
  • 11:49, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Blue.guelph.sharcnet (content was: "#REDIRECT Storage systems" (and the only contributor was "Afrepues"))
  • 11:48, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Tope (GPU system) (content was: "#REDIRECT Tope" (and the only contributor was "Ppomorsk"))
  • 11:48, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Saw new (content was: "#REDIRECT Saw")
  • 11:47, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Angel (GPU cluster) (content was: "#REDIRECT Angel" (and the only contributor was "Merz"))
  • 11:46, 22 April 2019 Ppomorsk (Talk | contribs) deleted page ActivePerl (content was: "#REDIRECT ACTIVEPERL" (and the only contributor was "Roberpj"))
  • 11:46, 22 April 2019 Ppomorsk (Talk | contribs) deleted page OBSOLETE (content was: "#REDIRECT BLAS" (and the only contributor was "Roberpj"))
  • 11:45, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Using Bramble (content was: "#REDIRECT Bramble" (and the only contributor was "Dbm"))
  • 11:45, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Wait time distribution (content was: "#REDIRECT Current wait time distribution" (and the only contributor was "Razoumov"))
  • 11:45, 22 April 2019 Ppomorsk (Talk | contribs) deleted page ScaLAPACK (content was: "#REDIRECT SCALAPACK" (and the only contributor was "Roberpj"))
  • 11:44, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Yorick (content was: "#REDIRECT YORICK" (and the only contributor was "Roberpj"))
  • 11:43, 22 April 2019 Ppomorsk (Talk | contribs) deleted page WIEN2k (content was: "#REDIRECT WIEN2K" (and the only contributor was "Roberpj"))
  • 11:42, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Viz1-yorku (content was: "#REDIRECT Visualization Workstations" (and the only contributor was "Tyson"))
  • 11:42, 22 April 2019 Ppomorsk (Talk | contribs) deleted page Viz1-uwaterloo (content was: "#REDIRECT Visualization Workstations" (and the only contributor was "Isaac"))
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