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Below is a list of the most recent deletions.

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  • 17:37, 19 February 2020 Ppomorsk (Talk | contribs) deleted page DIGITS (mosaic and copper retired so this page no longer needed)
  • 17:36, 19 February 2020 Ppomorsk (Talk | contribs) deleted page Torch (mosaic and copper retired so this page no longer needed)
  • 17:36, 19 February 2020 Ppomorsk (Talk | contribs) deleted page BIDMach (mosaic and copper retired so this page no longer needed)
  • 17:36, 19 February 2020 Ppomorsk (Talk | contribs) deleted page Caffe (mosaic and copper retired so this page no longer needed)
  • 17:35, 19 February 2020 Ppomorsk (Talk | contribs) deleted page Theano (mosaic and copper retired so this page no longer needed)
  • 17:35, 19 February 2020 Ppomorsk (Talk | contribs) deleted page Tensorflow (mosaic and copper retired so this page no longer needed)
  • 16:31, 21 November 2019 Ppomorsk (Talk | contribs) deleted page TEXLIVE (this page is old and obsolete)
  • 16:29, 21 November 2019 Ppomorsk (Talk | contribs) deleted page Handling Large Arrays (rather basic page, not really useful)
  • 13:39, 12 November 2019 Ppomorsk (Talk | contribs) restored page Globus (33 revisions restored)
  • 13:29, 8 November 2019 Syam (Talk | contribs) deleted page Computational Fluid Dynamics (content was: "=Introduction= This page is intended to serve as a community and information hub for our computational fluid dynamics users. It is our hope that users and staff whoever will be able to share tips and tricks, information about what thei...")
  • 13:29, 8 November 2019 Syam (Talk | contribs) deleted page OPENFOAM (content was: "{{Template:CCDelete}} {{Template:GrahamUpdate}} {{Software |package_name=OPENFOAM |package_description=open source CFD software package |package_idnumber=117 }} ==Introduction== OpenFOAM is a free, open source CFD software package prod...")
  • 12:45, 8 November 2019 Syam (Talk | contribs) deleted page Make utility and makefiles (content was: "{{Template:GrahamUpdate}} ===Overview=== The make utility reads a makefile containing instructions on how to compile and link your source files to produce an executable. You can write instructions in the makefile to test environment vari...")
  • 12:40, 8 November 2019 Syam (Talk | contribs) deleted page VISIT (content was: "{{Template:CCDelete}} {{Software |package_name=Visit |package_description=A free interactive parallel visualization and graphical analysis tool |package_idnumber=70 }} {{Template:LegacyPage}} =Introduction= VISIT is installed on select...")
  • 12:38, 8 November 2019 Syam (Talk | contribs) deleted page Serial / parallel farming (or throughput computing) (content was: "{{Template:LegacyPage}} =Introduction= ==Throughput computing / serial and parallel farming== ===Definitions=== Throughput computing is a method for solving computational problems in a short amount of time. The method involves decompos...")
  • 12:37, 8 November 2019 Syam (Talk | contribs) deleted page Machine Learning and Data Mining (content was: "=Introduction= This page is intended to serve as a community and information hub for our machine learning/deep learning and data mining users. __TOC__ =Hardwares= ==Graham== [https://docs.computecanada.ca/wiki/Graham GRAHAM] is a hete...")
  • 12:31, 8 November 2019 Syam (Talk | contribs) deleted page Common Bugs and Debugging with gdb (content was: "{{Template:GrahamUpdate}} == Overview == <p> This tutorial provides a concise explanation of frequently encountered bugs and how to use gdb to debug serial programs at SHARCNET. It is not comprehensive and only aims to give users enough...")
  • 12:20, 8 November 2019 Syam (Talk | contribs) deleted page Seminars and Workshops (content was: "===Summer School Archives=== * [http://www.sharcnet.ca/events/ss2015/ Summer School 2015]. * [http://www.sharcnet.ca/events/ss2014/ Summer School 2014]. * [http://ss2013.sharcnet.ca/ Summer School 2013]. * [http://ss2012.sharcnet.ca/ Su...")
  • 12:20, 8 November 2019 Syam (Talk | contribs) deleted page Serial code profiling using gprof (content was: "{{Template:LegacyPage}} <!--checked2015--> Serial code profiling is done for two main reasons: * To improve (sometimes dramatically) the efficiency of the serial code, or * As the important first step when converting a serial code to...")
  • 12:19, 8 November 2019 Syam (Talk | contribs) deleted page Programming (content was: "<!-- checked 2019 Ed --> == Programming == ===Serial Processing=== * Serial / parallel farming (or throughput computing) (self-directed tutorial) ===General Parallel Programming=== * Overview of HPC (s...")
  • 12:12, 8 November 2019 Syam (Talk | contribs) deleted page HDF (content was: "{{Template:CCDelete}} {{Software |package_name=HDF |package_description=Hierarchical Data Format |package_idnumber=48 }} =Introduction= The sharcnet HDF installation provides a serial and parallel build of HDF5. See the [http://www.hd...")
  • 12:02, 8 November 2019 Syam (Talk | contribs) deleted page Automating Tasks Using bash (content was: "== What is a shell? == User interfaces are the abstraction through which human beings interact with computers. We can partition the majority of user interfaces into two types: the '''graphical user interface'', which is familiar to mos...")
  • 11:55, 8 November 2019 Syam (Talk | contribs) deleted page Serial farming and Monte Carlo for SHARCNET (content was: "{{GrahamUpdate}} =What is serial farming, and who needs it?= Serial farming is solving a computational (research, engineering etc.) problem by running a bunch of serial jobs on a cluster. You need serial farming, if your problem belongs...")
  • 11:49, 8 November 2019 Syam (Talk | contribs) deleted page CUDA tips and tricks (content was: "<!--checked2015--> <!--checked2016--> = Overview = This page contains a collection of useful tips and tricks for CUDA GPU programmers. Everyone (users and staff) is welcome to add to and modify this wiki page. = Reduction = == Binary...")
  • 11:45, 8 November 2019 Syam (Talk | contribs) deleted page MAP (content was: "{{Template:CCDelete}} {{Software |package_name=MAP |package_description=MPI profiler |package_idnumber=145 }} {{NeedsGraphics}} =Graham instructions= DDT and MAP can now be used on our newest cluster, Graham. MAP doesn't require any...")
  • 11:28, 8 November 2019 Syam (Talk | contribs) deleted page K20 (content was: "'''This page is mostly outdated, as newer and more powerful Pascal GPUs are now available across Compute Canada (in Graham, Cedar etc.).''' = Availability = == SHARCNET == [https://www.sharcnet.ca/my/systems/show/106 Mosaic], 20 nodes,...")
  • 16:59, 6 November 2019 Ppomorsk (Talk | contribs) deleted page Globus (the page on CC wiki is better)
  • 16:44, 6 November 2019 Ppomorsk (Talk | contribs) deleted page CUDA (obsolete, page exists on CC wiki)
  • 15:55, 6 November 2019 Ppomorsk (Talk | contribs) deleted page ANSYS (dusky now repaved to graham image, so this page obsolete)
  • 15:54, 6 November 2019 Ppomorsk (Talk | contribs) deleted page STAR-CCM+ (dusky now repaved to graham image, so this page obsolete)
  • 15:53, 6 November 2019 Ppomorsk (Talk | contribs) deleted page COMSOL (dusky now repaved to graham image, so this page obsolete)
  • 15:53, 6 November 2019 Ppomorsk (Talk | contribs) deleted page ABAQUS (dusky now repaved to graham image, so this page obsolete)
  • 10:32, 15 October 2019 Ppomorsk (Talk | contribs) restored page New user seminar (10 revisions restored: requested by Sergey)
  • 16:13, 6 August 2019 Ppomorsk (Talk | contribs) deleted page Panda-qiime (content was: "{{Template:CCDelete}} =Qiime, PANDAseq & USearch= QIIME (canonically pronounced chime) stands for Quantitative Insights Into Microbial Ecology, is an open-source bioinformatics pipeline for performing microbiome analysis from raw DNA seq...")
  • 10:40, 30 July 2019 Ppomorsk (Talk | contribs) deleted page Using Subversion (content was: "==Overview== This page contains the basic information on how to use Subversion (SVN) for keeping track of your files of different versions during the courses of development. Every PI has a SVN repository at <pre> https://subversion.sha...")
  • 12:09, 26 May 2019 Ppomorsk (Talk | contribs) deleted page ORCA (page on CC wiki about this package already exists)
  • 12:37, 24 May 2019 Ppomorsk (Talk | contribs) deleted page Apache Spark (content was: "{{Delete|obsolete}}")
  • 12:43, 16 May 2019 Ppomorsk (Talk | contribs) deleted page New user seminar (content was: "The recorded new user seminar (only covers our legacy systems; not for Graham) is available at the following:<br> https://www.youtube.com/watch?v=p6QNVk8sSjM<br> <br> Register for an online seminar (which is primarily for Graham):<br> ht...")
  • 12:40, 16 May 2019 Ppomorsk (Talk | contribs) deleted page EMBOSS (content was: "{{Template:LegacyPage}} <!--checked2016--> In order to install EMBOSS in one's user environment on SHARCNet systems the package needs to be placed in the SHARCNet file systems, unpacked, installed and then user's PATH needs to be modifie...")
  • 12:35, 16 May 2019 Ppomorsk (Talk | contribs) deleted page GPU Accelerated Computing (content moved to "Legacy Systems")
  • 12:22, 16 May 2019 Ppomorsk (Talk | contribs) deleted page Domain Portals (content was: "==Domain portals== Here we provide some additional information for SHARCNET users from the following areas: * Machine Learning and Data Mining * Computational Fluid Dynamics")
  • 12:19, 16 May 2019 Ppomorsk (Talk | contribs) deleted page Using Storage (moved content to "Legacy Systems")
  • 13:46, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Specifying Resource Requirements (content was: "{{Template:GrahamUpdate}} Graph 1 : Memory request utilization on Orca in 2012 Image:orca_runtime.png|400px|thumbnail|right|alt=Runtime estimate vs...")
  • 13:43, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Chemistry and Biochemistry (content was: "#REDIRECT Chemistry, Biochemistry and Biophysics" (and the only contributor was "Jemmyhu"))
  • 13:43, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Using MATLAB (content was: "#redirectMATLAB")
  • 13:43, 15 May 2019 Ppomorsk (Talk | contribs) deleted page JDK (content was: "#REDIRECT OPENJDK" (and the only contributor was "Roberpj"))
  • 13:38, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Cloud (content was: "#REDIRECT Carpet" (and the only contributor was "Edward"))
  • 13:37, 15 May 2019 Ppomorsk (Talk | contribs) deleted page OpenStack (content was: "#REDIRECT Cloud" (and the only contributor was "Edward"))
  • 13:05, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Bioinformatics (content was: "<!--checked2016--> =Introduction= This page is intended to serve as a community and information hub for our bioinformatics users. It is our hope that interested users and staff share tips and tricks, information about what their groups...")
  • 13:05, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Chemistry, Biochemistry and Biophysics (content was: "{{Template:GrahamUpdate}} ==Introduction== This page is intended to serve as a community and information hub for our computational chemistry, biochemistry and bi..." (and the only contributor was "Jemmyhu"))
  • 13:05, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Astrophysics Portal (content was: "{{Template:GrahamUpdate}} =Introduction= This page is intended to serve as a community and information hub for our computational astrophysics users. It is our hope that users and staff who are astrophysics savvy will be able to share...")
  • 12:04, 15 May 2019 Ppomorsk (Talk | contribs) deleted page Astrophysics/FLASH3 (content was: "{{Template:Outdated}} This page is for an old (circa 2011) project. ==FLASH3 project== On Saw FLASH2.5: /work/kirshdr/FLASH2.5/ FLASH3.3: /work/kirshdr/FLASH3.3/ == gas drag == 2.5/source/particles/active/short_range/ShortRangeFo...")
  • 12:34, 14 May 2019 Ppomorsk (Talk | contribs) deleted page Google Test (content was: "=Software Information= Google Test is Google's C++ test framework. * URL: https://github.com/google/googletest =Foreword= The following installation instructions are based on work done in [https://www.sharcnet.ca/my/problems/ticket/2...")
  • 12:33, 14 May 2019 Ppomorsk (Talk | contribs) deleted page QD (content was: "{{Software |package_name=QD |package_description=A package that supports a double-double datatype with about 32 decimal digits |package_idnumber=11 }} =Introduction= QD is a library supporting quadruple precision. SHARCNET provides this...")
  • 12:31, 14 May 2019 Ppomorsk (Talk | contribs) deleted page DDT (there is a DDT page on CC wiki with this content)
  • 12:30, 14 May 2019 Ppomorsk (Talk | contribs) deleted page ASE (content was: "= steps to install ASE in your own space = 1. Installation, take a look at how to use pip at Sharcnet https://www.sharcnet.ca/help/index.php/Python#Using_pip I..." (and the only contributor was "Jemmyhu"))
  • 12:30, 14 May 2019 Ppomorsk (Talk | contribs) deleted page DAR (content was: "{{Software |package_name=dar |package_description=A shell command to back up directory trees and files |package_idnumber=140 }} =Introduction= Dar is a shell command that backs up directory trees and files, taking care of hard links, E...")
  • 12:29, 14 May 2019 Ppomorsk (Talk | contribs) deleted page ARPACK-NG (content was: "{{Software |package_name=ARPACK-NG |package_description=a collection of Fortran77 subroutines to solve eigenvalue problems |package_idnumber=112 }} =Introduction= ARPACK is a collection of Fortran77 subroutines designed to solve large s...")
  • 12:28, 14 May 2019 Ppomorsk (Talk | contribs) deleted page BIOPERLRUN (content was: "{{Software |package_name=BIOPERLRUN |package_description=Provides a suite bioperlrun wrapper interface modules to various bioinformatics applications. |package_id..." (and the only contributor was "Roberpj"))
  • 12:25, 14 May 2019 Ppomorsk (Talk | contribs) deleted page AMICA (content was: "<big>'''AMICA''' is an "Code for AMICA: Adaptive Mixture ICA with shared components". (Page created & building steps tested by Paul Preney on Dec. 9, 2016.) ==Building AMICA on Graham== To build AMICA on Graham (tested Aug. 30, 2017):...")
  • 12:22, 14 May 2019 Ppomorsk (Talk | contribs) deleted page BIO-SAMTOOLS (content was: "{{Template:GrahamUpdate}} =1.38= Tested on orca running centos 6.4 by doug@sharcnet.ca on Jul29, 2013. Step 1) Prepare environment ... <pre> cd ~/ module purge all /bin/rm -rf .cpan perl5 (optional) export PERL5LIB=/home/$USER/perl5/li...")
  • 12:18, 14 May 2019 Ppomorsk (Talk | contribs) deleted page TopHat (content was: "<big>'''TopHat''' is a fast splice junction mapper for RNA-Seq reads. ==Tophat installation on new Compute Canada systems (cedar and graham)== wget https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz tar xvfz tophat-2.1...")
  • 12:17, 14 May 2019 Ppomorsk (Talk | contribs) deleted page PopAlu (content was: "{{Template:LegacyPage}} =Software Information= PopAlu is an open source C++ project: * URL: https://github.com/aimeida/PopAlu =Foreword= The following installation instructions are based on work done in [https://www.sharcnet.ca/my/pr...")
  • 11:50, 14 May 2019 Ppomorsk (Talk | contribs) deleted page LSPREPOST (content was: "{{Software |package_name=LSPREPOST |package_description=Pre and Post processor for ls-dyna. |package_idnumber=155 }} =Introduction= LS-PrePost is an advanced in..." (and the only contributor was "Roberpj"))
  • 11:47, 14 May 2019 Ppomorsk (Talk | contribs) deleted page SAMTOOLS (content was: "{{Software |package_name=SAMTOOLS |package_description=Sequence Alignment/Map generic format for storing large nucleotide sequence alignments. |package_idnumber=163 }} =Introduction= SAM (Sequence Alignment/Map) is a flexible generic fo...")
  • 16:33, 13 May 2019 Ppomorsk (Talk | contribs) deleted page VMD (content was: "{{Software |package_name=VMD |package_description=Program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scri..." (and the only contributor was "Roberpj"))
  • 16:32, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Dice (content was: "=0.9= * NOTE: The Dice web site is here: https://sanshar.github.io/Dice/ Tested on orca running centos 6.8 by preney@sharcnet.ca on June 6, 2017.<br> 1) Download Instructions <pre>cd $HOME mkdir build cd build # Download DICE: wget ht...")
  • 16:31, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Dedicated Programming Support Projects (content was: "#REDIRECT Code Repositories")
  • 16:30, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Ssh for Windows Users (content was: "#REDIRECTSSH#Windows" (and the only contributor was "Ppomorsk"))
  • 16:29, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Genome-wide Prediction of Mutant Single Nucleotide Polymorphisms based on Shannon Information Theory (moved to staff wiki)
  • 16:28, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Individual-based Model of Forest Dynamics to Study Global Ecological Change (moved to staff wiki)
  • 16:23, 13 May 2019 Ppomorsk (Talk | contribs) deleted page International summer school (content was: "[http://summerschool.niif.hu/ ISS 2014] - International Summer School 2014 June 01 to 06, 2014, Budapest SHARCNET attendee: Tyson Whitehead Other Compute Canada attendees: Jonathan Ferland = Talks = == Exascale == * good intro talk...")
  • 16:21, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Managing your files effectively at SHARCNET with SVN (content was: "#REDIRECT Webinar 2014 Managing your files effectively at SHARCNET with SVN" (and the only contributor was "Edward"))
  • 16:21, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Introduction for Linux Abstract (content was: "#REDIRECT Webinar 2013 Introduction for Linux Abstract" (and the only contributor was "Ppomorsk"))
  • 16:16, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Stock Prediction Using Recurrent Neural Network (content was: "#REDIRECT Webinar 2018 Stock Prediction Using Recurrent Neural Network" (and the only contributor was "Ppomorsk"))
  • 16:15, 13 May 2019 Ppomorsk (Talk | contribs) deleted page The Benefits of GLOST for Many Jobs (content was: "#REDIRECT Webinar 2018 The Benefits of GLOST for Many Jobs" (and the only contributor was "Ppomorsk"))
  • 16:12, 13 May 2019 Ppomorsk (Talk | contribs) deleted page All about job wait times in the Graham queue (content was: "#REDIRECT Webinar 2018 All about job wait times in the Graham queue" (and the only contributor was "Ppomorsk"))
  • 16:12, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Using Computational Chemistry software effectively on Graham (content was: "#REDIRECT Webinar 2018 Using Computational Chemistry software effectively on Graham" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Fundamentals of working at the command line at Graham (content was: "#REDIRECT Webinar 2018 Fundamentals of working at the command line at Graham" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Debugging on Graham with DDT (content was: "#REDIRECT Webinar 2018 Debugging on Graham with DDT" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Introduction to MySQL on Graham (content was: "#REDIRECT Webinar 2018 Introduction to MySQL on Graham" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Harnessing the Power of Heterogeneous Computing using Boost.Compute + OpenCL (content was: "#REDIRECT Webinar 2018 Harnessing the Power of Heterogeneous Computing using Boost.Compute + OpenCL" (and the only contributor was "Ppomorsk"))
  • 16:10, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Concurrent File I/O by Multiple Processes (content was: "#REDIRECT Webinar 2018 Concurrent File I/O by Multiple Processes" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Understand (and potentially reduce) job wait times (content was: "#REDIRECT Webinar 2018 Understand (and potentially reduce) job wait times" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Using MATLAB effectively on Graham and Cedar (content was: "#REDIRECT Webinar 2018 Using MATLAB effectively on Graham and Cedar" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MySQL Part 2: Relations and Joins (content was: "#REDIRECT Webinar 2018 MySQL Part 2: Relations and Joins" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Using Pseudorandom Number Sequences in C++ (content was: "#REDIRECT Webinar 2018 Using Pseudorandom Number Sequences in C++" (and the only contributor was "Ppomorsk"))
  • 16:09, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Code profiling on Graham (content was: "#REDIRECT Webinar 2018 Code profiling on Graham" (and the only contributor was "Ppomorsk"))
  • 16:04, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Dipping into C++17 Parallel Algorithms with Intel's Parallel STL (content was: "#REDIRECT Webinar 2019 Dipping into C++17 Parallel Algorithms with Intel's Parallel STL" (and the only contributor was "Ppomorsk"))
  • 16:04, 13 May 2019 Ppomorsk (Talk | contribs) deleted page The Monad Understanding Hurdle (content was: "#REDIRECT Webinar 2019 The Monad Understanding Hurdle" (and the only contributor was "Ppomorsk"))
  • 16:04, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Best practices on Graham (content was: "#REDIRECT Webinar 2019 Best practices on Graham" (and the only contributor was "Ppomorsk"))
  • 16:03, 13 May 2019 Ppomorsk (Talk | contribs) deleted page What Happened To My Job? (content was: "#REDIRECT Webinar 2019 What Happened To My Job?" (and the only contributor was "Ppomorsk"))
  • 16:03, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Introduction to parallel programming with MPI and Python (content was: "#REDIRECT Webinar 2019 Introduction to parallel programming with MPI and Python" (and the only contributor was "Ppomorsk"))
  • 16:03, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Exploring Octave package dataframe (content was: "#REDIRECT Webinar 2019 Exploring Octave package dataframe" (and the only contributor was "Ppomorsk"))
  • 16:03, 13 May 2019 Ppomorsk (Talk | contribs) deleted page PRE and POST production on Graham (content was: "#REDIRECT Webinar 2019 PRE and POST production on Graham" (and the only contributor was "Ppomorsk"))
  • 13:34, 13 May 2019 Ppomorsk (Talk | contribs) deleted page CONVERGE (content was: "{{Software |package_name=CONVERGE |package_description=CFD Code Using the AMR Mesh Generation Technique |package_idnumber=154 }} =Introduction= A converge module is made available on sharcnet to run large jobs in the mpi queue. =Versi...")
  • 13:33, 13 May 2019 Ppomorsk (Talk | contribs) deleted page CaMa-Flood (content was: "{{Template:GrahamUpdate}} The CaMa-Flood (Catchment-based Macro-scale Floodplain) model is designed to simulate the hydrodynamics in continental-scale rivers. ==CaMa-Flood v3.6.2 installation guide== To build this software on SHARCNET,...")
  • 13:33, 13 May 2019 Ppomorsk (Talk | contribs) deleted page CPAN (content was: "{{Template:LegacyPage}} {{Software |package_name=CPAN |package_description=The Comprehensive Perl Archive Network|package_idnumber=169 }} =Introduction= A meta module providing an updated version of the Cpan shell. =Version Selection=...")
  • 13:32, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Caret (content was: "=6.0.78= Below steps tested on orca running centos 6.9 by doug@sharcnet.ca on Feb 21, 2018.<br> <pre> ssh orca.sharcnet.ca [roberpj@orc-login1:~] ssh orc-dev3..." (and the only contributor was "Roberpj"))
  • 13:30, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Programming Xeon Phi (content was: " =The Architecture= Xeon Phi is the first Intel Many Integrated Core (MIC) architecture product that combines many Intel CPU cores onto a single chip. The Xeon Phi co-processor can be considered as an on-chip computing node which has 60(...")
  • 13:29, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Pyomo (content was: "== Introduction == Pyomo is a Python-based open-source software package that supports a diverse set of optimization capabilities for formulating, solving, and an..." (and the only contributor was "Jnandez"))
  • 13:29, 13 May 2019 Ppomorsk (Talk | contribs) deleted page NWCHEM (content was: "{{Software |package_name=NWCHEM |package_description=A computational chemistry package |package_idnumber=12 }} ==Introduction== NWChem is a computational chemistry package that is designed to run on high-performance parallel supercompute...")
  • 13:28, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MPFUN (content was: "{{Template:LegacyPage}} {{Software |package_name=MPFUN |package_description=A Fortran-90 arbitrary precision package |package_idnumber=16 }} ===Introduction=== MPFUN90 is a Fortran-90 arbitrary precision package (i.e. user specifies the...")
  • 13:28, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MODE (content was: "{{Template:LegacyPage}} {{Software |package_name=MODE |package_description=Lumerical MODE provides tools for guided and eigenmode expansion (EME) solver |package_idnumber=162 }} =Introduction= Provides mode software for use by research...")
  • 13:27, 13 May 2019 Ppomorsk (Talk | contribs) deleted page TRINITY (content was: "<!--checked2016--> {{Template:GrahamUpdate}} =2.0.6= This document provides test and build instructions for http://trinityrnaseq.github.io/ provided by doug@sharcnet.ca 17jun2015: 1) Demonstrate howto use the 'unsupported' sharcnet bui...")
  • 13:27, 13 May 2019 Ppomorsk (Talk | contribs) deleted page PETSC SLEPC (content was: "<!--checked2016--> {{Software |package_name=PETSC_SLEPC |package_description=A suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations |package_idnum...")
  • 13:26, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Pymol (content was: "{{GrahamUpdate}} ==Pymol on new Compute Canada systems (cedar and graham)== Pymol can be installed through Anaconda (see [https://docs.computecanada.ca/wiki/Anaconda/en Anaconda page] on docs.computecanada.ca for more details). First,...")
  • 13:25, 13 May 2019 Ppomorsk (Talk | contribs) deleted page PARI/GP (content was: "{{Software |package_name=PARI/GP |package_description=A computer algebra system designed for fast computations in number theory |package_idnumber=93 }} <b>Introduction</b> Please note PARI/GP is a package installed as part of the opera...")
  • 13:24, 13 May 2019 Ppomorsk (Talk | contribs) deleted page LLVM (content was: "{{Software |package_name=LLVM |package_description=The LLVM Compiler Project with Sub-Projects Clang,Openmp,Polly |package_idnumber=185 }} =Version Selection= <..." (and the only contributor was "Roberpj"))
  • 13:24, 13 May 2019 Ppomorsk (Talk | contribs) deleted page JULIA (content was: "{{Template:GrahamUpdate}} {{stub}} =versions and installation= ==0.6.2== The following two commands will (1) download the Julia binary from the website (julialang.org) as a tar file, and (2) extract the tar file. The target directory...")
  • 13:22, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Winsshfs (content was: "#REDIRECT SSHFS" (and the only contributor was "Edward"))
  • 13:22, 13 May 2019 Ppomorsk (Talk | contribs) deleted page YT (content was: "{{Template:GrahamUpdate}} {{Software |package_name=Yt |package_description=Visualization |package_idnumber=151 }} ==Introduction== The yt project is a Python package for analyzing and visualizing volumetric, multi-resolution astrophysic...")
  • 13:22, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Yambo (content was: "{{Template:GrahamUpdate}} Jemmy Hu, Oct. 18, 2016 Steps to build Yambo on Sharcnet 1) using the default the environment settings [jemmyhu@saw-login1:~/work/software/yambo/4.0.4] module list Currently Loaded Modulefiles: 1) torque/...")
  • 13:21, 13 May 2019 Ppomorsk (Talk | contribs) deleted page XCRYSDEN (content was: "{{Software |package_name=XCRYSDEN |package_description=Visualization software |package_idnumber=94 }} = XCrySDen on Cedar and Graham= On cedar and graham XCrySDen is installed as a module. To use it, connect with the graphical interfa...")
  • 13:20, 13 May 2019 Ppomorsk (Talk | contribs) deleted page SeqAn (content was: "{{Template:GrahamUpdate}} =Software Information= SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. * URL: http://www.seqan.de/ * Downloads:...")
  • 13:19, 13 May 2019 Ppomorsk (Talk | contribs) deleted page ILOGCPLEX (content was: "{{Template:GrahamUpdate}} {{Software |package_name=ILOGCPLEX |package_description=A component of IBM ILOG CPLEX Optimization Studio |package_idnumber=109 }} =Introduction= Users must join first the <i>ilogcplex</i> group before the sof...")
  • 12:38, 13 May 2019 Ppomorsk (Talk | contribs) deleted page OPENMPI (content was: "{{Software |package_name=OPENMPI |package_description=Implementation of MPI-1 and MPI-2 message passing standards |package_idnumber=5 }} =Compute Canada Clusters= The default module version of OpenMPI on cedar, graham and new-orca is v...")
  • 12:35, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Wise2/Genewise (content was: "This software is related to ticket 24610[https://www.sharcnet.ca/my/problems/ticket/24610] and ticket 25036[https://www.sharcnet.ca/my/problems/ticket/25036] To build wise2, you should start with unzipping the tar file, then the "glib-c...")
  • 12:35, 13 May 2019 Ppomorsk (Talk | contribs) deleted page YAML-CPP (content was: "{{LegacyPage}} =0.5.2= The following installation instructions are based on https://github.com/jbeder/yaml-cpp/blob/master/install.txt Apr27,2015 <doug@sharcnet.ca>: ===System Installs=== Both yamp-cpp and yamp-cpp-devel repository...")
  • 12:32, 13 May 2019 Ppomorsk (Talk | contribs) deleted page Transposome (content was: "<!-- Checked 2019 Ed --> =Software Information= Transposome is a toolkit for annotation of transposable element families from unassembled sequence reads. * URL: http://sestaton.github.io/Transposome * Git: https://github.com/sestaton/T...")
  • 12:32, 13 May 2019 Ppomorsk (Talk | contribs) deleted page FSL (content was: "<!--checked2016--> == General Info == [http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/ FSL website] FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data. It runs on Apple and PCs (both Linux, and Windows via...")
  • 12:31, 13 May 2019 Ppomorsk (Talk | contribs) deleted page VASP (content was: "{{Template:GrahamUpdate}} <big>'''VASP''': The Vienna Ab initio Simulation Package (VASP) is a computer program for atomic scale materials modelling, e.g. electronic structure calculations and quantum-mechanical molecular dynamics, from...")
  • 12:29, 13 May 2019 Ppomorsk (Talk | contribs) deleted page NETCDF (content was: "{{GrahamUpdate}} {{Software |package_name=NETCDF |package_description=An interface for array-oriented data access and a library that provides an implementation of the interface |package_idnumber=18 }} =Introduction= Provides NetCDF for...")
  • 12:27, 13 May 2019 Ppomorsk (Talk | contribs) deleted page PARPACK (content was: "#REDIRECT ARPACK-NG" (and the only contributor was "Roberpj"))
  • 12:25, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MrBAYES (content was: "{{Software |package_name=MrBAYES |package_description=Bayesian estimation of phylogeny |package_idnumber=37 }} =Introduction= MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evoluti...")
  • 12:25, 13 May 2019 Ppomorsk (Talk | contribs) deleted page RLWRAP (content was: "{{Software |package_name=RLWRAP |package_description=A small utility that uses the GNU readline library |package_idnumber=124 }} =Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters cedar a...")
  • 12:24, 13 May 2019 Ppomorsk (Talk | contribs) deleted page GlimmerHMM (content was: "<!--checked2016--> =3.0.1= This document explains howto compile 64bit binaries for GlimmerHMM to run on sharcnet clusters. Provided by doug@sharcnet.ca 26jun201..." (and the only contributor was "Roberpj"))
  • 12:24, 13 May 2019 Ppomorsk (Talk | contribs) deleted page GAP (content was: "{{Software |package_name=GAP |package_description=System for computational discrete algebra. |package_idnumber=139 }} =Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters cedar and graham....")
  • 12:23, 13 May 2019 Ppomorsk (Talk | contribs) deleted page FFTW (content was: "{{Software |package_name=FFTW |package_description=library |package_idnumber=14 }} ==Introduction== FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and...")
  • 12:19, 13 May 2019 Ppomorsk (Talk | contribs) deleted page RUBY (content was: "{{Template:GrahamUpdate}} {{Software |package_name=RUBY |package_description=An open source programming language with a focus on simplicity and productivity |pack..." (and the only contributor was "Roberpj"))
  • 12:19, 13 May 2019 Ppomorsk (Talk | contribs) deleted page MGLTOOLS (content was: "{{Software |package_name=MGLTOOLS |package_description=Visualization and analysis of molecular structures. |package_idnumber=176 }} =Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters ced...")
  • 12:19, 13 May 2019 Ppomorsk (Talk | contribs) deleted page LRS (content was: "{{Template:LegacyPage}} =060= * This wiki shows howto compile MPLRS following the source <i>readme</i> file. Posted by <doug@sharcnet.ca> 24sep2015. <pre> ssh iqaluk.sharcnet.ca module unload intel openmpi mkl module load intel/15.0.3...")
  • 16:30, 10 May 2019 Ppomorsk (Talk | contribs) restored page ABAQUS (325 revisions restored: turns out this is still needed on remaining legacy systems)
  • 12:23, 10 May 2019 Ppomorsk (Talk | contribs) deleted page Template:Ancient 27047 (content was: "{| cellpadding=5 style="border:4px solid #CD5C5C" |- bgcolor="#FFDAB9" | This page is flagged as an 'ancient wiki page' and is under review in ticket {{{1}}}. |} __..." (and the only contributor was "Edward"))
  • 16:42, 9 May 2019 Ppomorsk (Talk | contribs) deleted page NCBI/C++TOOLKIT (content was: "#REDIRECT NCBIC++TOOLKIT" (and the only contributor was "Roberpj"))
  • 16:40, 9 May 2019 Ppomorsk (Talk | contribs) deleted page LUMERICAL (content was: "#REDIRECT FDTD" (and the only contributor was "Roberpj"))
  • 16:40, 9 May 2019 Ppomorsk (Talk | contribs) deleted page LS-DYNA (content was: "#REDIRECT LSDYNA" (and the only contributor was "Roberpj"))
  • 16:39, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Usearch (content was: "#REDIRECT Panda-qiime {{GrahamUpdate}}")
  • 16:39, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Git (content was: "#REDIRECT GIT" (and the only contributor was "Tyson"))
  • 16:37, 9 May 2019 Ppomorsk (Talk | contribs) deleted page GIT (content was: "#REDIRECT Using Git" (and the only contributor was "Ppomorsk"))
  • 16:36, 9 May 2019 Ppomorsk (Talk | contribs) deleted page SUBVERSION (content was: "#REDIRECT Using Subversion" (and the only contributor was "Ppomorsk"))
  • 16:10, 9 May 2019 Ppomorsk (Talk | contribs) deleted page GNUPLOT (content was: "#REDIRECT Using gnuplot" (and the only contributor was "Ppomorsk"))
  • 16:02, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Using parallel I/O in SHARCNET (content was: "#REDIRECT Webinar 2015 Using parallel I/O in SHARCNET" (and the only contributor was "Edward"))
  • 16:01, 9 May 2019 Ppomorsk (Talk | contribs) deleted page ParaView (content was: "#REDIRECT Visualization of 2D and 3D datasets with ParaView" (and the only contributor was "Razoumov"))
  • 16:00, 9 May 2019 Ppomorsk (Talk | contribs) deleted page OpenFOAM (content was: "#REDIRECT OPENFOAM" (and the only contributor was "Roberpj"))
  • 15:56, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Sshfuse (content was: "#REDIRECT SSHFS" (and the only contributor was "Edward"))
  • 15:56, 9 May 2019 Ppomorsk (Talk | contribs) deleted page SPARK (content was: "#REDIRECT Apache Spark")
  • 15:54, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Deploying a web server. (content was: "#REDIRECT Deploying a web server" (and the only contributor was "Preney"))
  • 15:53, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Grass (content was: "{{Template:LegacyPage}} == Installing GRASS == This page describes GRASS installation on one of our visualization workstations. Choose GRASS installation directory export GRASSDIR=/work/username/grass Next download and compile PROJ4...")
  • 15:51, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Astrophysics (content was: "#REDIRECT Astrophysics Portal" (and the only contributor was "Tyson"))
  • 15:51, 9 May 2019 Ppomorsk (Talk | contribs) deleted page SHARCNET Astrophysics Portal (content was: "#REDIRECT Astrophysics" (and the only contributor was "Tyson"))
  • 15:49, 9 May 2019 Ppomorsk (Talk | contribs) deleted page PETSc SLEPc (content was: "#REDIRECT PETSC SLEPC" (and the only contributor was "Roberpj"))
  • 15:49, 9 May 2019 Ppomorsk (Talk | contribs) deleted page MrBayes (content was: "#REDIRECT MrBAYES")
  • 15:49, 9 May 2019 Ppomorsk (Talk | contribs) deleted page PANDAseq (content was: "#REDIRECT Panda-qiime" (and the only contributor was "Edward"))
  • 15:49, 9 May 2019 Ppomorsk (Talk | contribs) deleted page OpenCL (content was: "#REDIRECT OPENCL" (and the only contributor was "Roberpj"))
  • 15:48, 9 May 2019 Ppomorsk (Talk | contribs) deleted page OpenMPI (content was: "#REDIRECT OPENMPI" (and the only contributor was "Roberpj"))
  • 15:47, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Panda (content was: "#REDIRECT panda-qiime" (and the only contributor was "Edward"))
  • 15:47, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Qiime (content was: "#REDIRECT panda-qiime" (and the only contributor was "Edward"))
  • 15:47, 9 May 2019 Ppomorsk (Talk | contribs) deleted page SAMtools (content was: "#REDIRECT SAMTOOLS" (and the only contributor was "Roberpj"))
  • 15:46, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Signal Handling (content was: "#REDIRECT Signal Handling and Checkpointing" (and the only contributor was "Dbm"))
  • 15:46, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Remote X Connections to Sharcnet (content was: "#REDIRECT Remote Graphical Connections" (and the only contributor was "Tyson"))
  • 15:45, 9 May 2019 Ppomorsk (Talk | contribs) deleted page XCrySDen (content was: "#REDIRECT XCRYSDEN" (and the only contributor was "Roberpj"))
  • 15:44, 9 May 2019 Ppomorsk (Talk | contribs) deleted page VisIt (content was: "#REDIRECT VISIT" (and the only contributor was "Roberpj"))
  • 15:43, 9 May 2019 Ppomorsk (Talk | contribs) deleted page Remote File Access (content was: "{{Template:GrahamUpdate}} Note: this is a placeholder under development File management between SHARCNET systems and user's personal storage has always presented certain challenges, depending on the individual user's level of sophistic...")
  • 15:42, 9 May 2019 Ppomorsk (Talk | contribs) deleted page NetCDF (content was: "#REDIRECT NETCDF" (and the only contributor was "Roberpj"))
  • 15:42, 9 May 2019 Ppomorsk (Talk | contribs) deleted page ILOG/CPLEX (content was: "#REDIRECT ILOGCPLEX" (and the only contributor was "Roberpj"))
  • 14:27, 9 May 2019 Ppomorsk (Talk | contribs) deleted page PERL (content was: "{{Delete}}")
  • 15:39, 8 May 2019 Fm (Talk | contribs) deleted page ITK (re-deleted after undelete test)
  • 15:37, 8 May 2019 Fm (Talk | contribs) restored page ITK (8 revisions restored: test undelete)
  • 13:56, 8 May 2019 Ppomorsk (Talk | contribs) deleted page Improving your Python programs with NumPy and SciPy (content was: "#REDIRECT Webinar 2018 Improving your Python programs with NumPy and SciPy" (and the only contributor was "Ppomorsk"))
  • 13:54, 8 May 2019 Ppomorsk (Talk | contribs) deleted page ITK (content was: "{{Template:LegacyPage}} Insight Segmentation and Registration Toolkit (http://www.itk.org) is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis. The steps below ou...")
  • 13:53, 8 May 2019 Ppomorsk (Talk | contribs) deleted page ABAQUS (content was: "{{Delete|obsolete}}")
  • 13:53, 8 May 2019 Ppomorsk (Talk | contribs) deleted page ABINIT (content was: "{{delete|obsolete}}")
  • 13:52, 8 May 2019 Ppomorsk (Talk | contribs) deleted page ADF/BAND (content was: "{{delete|obsolete}}")
  • 13:52, 8 May 2019 Ppomorsk (Talk | contribs) deleted page AMBER (content was: "{{delete|obsolete}}")
  • 12:55, 6 May 2019 Ppomorsk (Talk | contribs) deleted page VESTA (content was: "{{Delete|obsolete}}")
  • 12:55, 6 May 2019 Ppomorsk (Talk | contribs) deleted page Big Data (content was: "{{Delete|obsolete}}")
  • 12:54, 6 May 2019 Ppomorsk (Talk | contribs) deleted page MAX3D: Visualization of Reciprocal Space (content was: "{{Delete|obsolete}}")
  • 10:25, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Supported Software Usage Documentation (content was: "#REDIRECT Supported Software Documentation" (and the only contributor was "Merz"))
  • 10:24, 3 May 2019 Ppomorsk (Talk | contribs) deleted page SYSTEM (content was: "{{Software |package_name=SYSTEM |package_description=Updated select system packages compiled with the gcc system compiler |package_idnumber=188 }} =Introduction=..." (and the only contributor was "Roberpj"))
  • 10:21, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Web portal (content was: "#REDIRECT Wiki tips and hints")
  • 10:18, 3 May 2019 Ppomorsk (Talk | contribs) deleted page OpenSees (content was: "'''OpenSees''' (Open System for Earthquake Engineering Simulation) is a software framework for simulating the seismic response of structural and geotechnical systems. It has advanced capabilities for modeling and analyzing the nonlinea...")
  • 10:15, 3 May 2019 Ppomorsk (Talk | contribs) deleted page OpenACC (content was: "{{Software |package_name=OpenACC |package_description=OpenACC - standard for parallel computing on heterogeneous systems (with GPGPUs) |package_idnumber= }} OpenACC is a programming standard for parallel computing, designed to simplify...")
  • 10:14, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Software (content was: "==Software== * Configuring your software environment with Modules * Supported Software Documentation (usage information for SHARCNET supported software) * Unsupported Software Documentation (documentation for unsupported soft...")
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Supported Software Documentation (content was: "{{Template:LegacyPage}} SHARCNET provides official support, including installing and maintaining the software, for a limited number of supported software packages. In addition, we also provide documentation that we and our user communit...")
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page HDFVIEW (content was: "{{Software |package_name=HDFVIEW |package_description=Visual Tool for Browsing and Editing HDF4 and HDF5 files. |package_idnumber=134 }} =Usage on new Compute Canada clusters= This software has not yet been installed on the new clusters...")
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page JALVIEW (content was: "{{Software |package_name=JALVIEW |package_description=Bioinformatic visualization package |package_idnumber=174 }} =Introduction= Provides a manual binary insta..." (and the only contributor was "Roberpj"))
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page EMACS (content was: "{{Software |package_name=EMACS |package_description=Text editor and much much more. |package_idnumber=175 }} =Introduction= The sharcnet module provides a newer..." (and the only contributor was "Roberpj"))
  • 10:13, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Bowtie2 (content was: " <big>'''Bowtie 2''' is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. ==Using Bowtie2 on Graham== Bowtie2 is installed as a module on Graham. <pre> module load bowtie2 </pre> After l...")
  • 10:12, 3 May 2019 Ppomorsk (Talk | contribs) deleted page GEOS (content was: "{{stub}} == General Info == GEOS http://trac.osgeo.org/geos/ was installed as a dependency for http://cran.r-project.org/web/packages/indicspecies/index.html == Version 3.4.2 == Version 3.4.2 was available on vdi-fedora20.user.sharcn...")
  • 10:12, 3 May 2019 Ppomorsk (Talk | contribs) deleted page GDB (content was: "{{Software |package_name=GDB |package_description=GDB https://www.gnu.org/software/gdb/ for debugging C, C++, Objective-C, Pascal and many more languages. |packag..." (and the only contributor was "Roberpj"))
  • 10:12, 3 May 2019 Ppomorsk (Talk | contribs) deleted page R (content was: "{{Software |package_name=R |package_description=a language and environment for statistical computing and graphics |package_idnumber=8 }} The documentation for using R on Compute Canada systems is available [https://docs.computecanada.ca...")
  • 10:11, 3 May 2019 Ppomorsk (Talk | contribs) deleted page NINJA (content was: "{{Software |package_name=NINJA |package_description=A small build system with a focus on speed. |package_idnumber=186 }} =Version Selection= <pre>module load ni..." (and the only contributor was "Roberpj"))
  • 10:11, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Using R and MPI (content was: " See documentation on [https://docs.computecanada.ca/wiki/R#Exploiting_parallelism_in_R Compute Canada Wiki]. The obsolete information previously on this page is available in the history of this article.")
  • 10:11, 3 May 2019 Ppomorsk (Talk | contribs) deleted page LAMMPS (content was: "{{Software |package_name=LAMMPS |package_description=Large-scale Atomic/Molecular Massively Parallel Simulator |package_idnumber=63 }} Up to date information about running LAMMPS is available on [https://docs.computecanada.ca/wiki/LAMMP...")
  • 10:10, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Hardware (content was: "==Hardware== * Hardware/System Resources (online reference of all documented systems) <!--* Current wait time distribution on core systems--> * NVIDIA K20/K80 GPU")
  • 10:10, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Scientific Computing (content was: "==Scientific Computing== * Solving Systems of Sparse Linear Equations (self-directed tutorial) * Using BLAS (LAPACK) routines with QD precision (62 digits). * LAPACK and ScaLAPACK Examples * INTERPRETERS vs COMPILERS *...")
  • 10:08, 3 May 2019 Ppomorsk (Talk | contribs) deleted page CuDNN (content was: "<big>'''cuDNN''' is an NVIDIA library with functionality used by deep neural network. It provides optimized versions of some operations like the convolution. cuDNN..." (and the only contributor was "Feimao"))
  • 10:08, 3 May 2019 Ppomorsk (Talk | contribs) deleted page OPENCV (content was: "{{Software |package_name=OPENCV |package_description=library of programming functions for real time computer vision |package_idnumber=135 }} =Introduction= The sharcnet openm module provides an uptodate version (compared to the version...")
  • 10:07, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Parallel Languages (content was: "=Haskell= Haskell is a mature, lazy, pure, functional language. These features can be summarized as follows * lazy - a value is not computed until needed, * pure - the output of a function is purely determined by its inputs, and * fu...")
  • 10:07, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Rmpi (content was: "If you have successfully built Rmpi and would like to share your findings with other sharcnet users enter the version number, system name, compilation instructions, build date and if you want to your username. <!--checked2015-->")
  • 10:06, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Globus / Gridftp (content was: "=Introduction= Globus is a method of copying large amounts of data securely and with a good speed between different servers/clusters, using browser-based interface. It is in active use in WestGrid and other consortia. It is using Gridft...")
  • 10:06, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Gaussian on SHARCNET systems (content was: "Please see [https://www.sharcnet.ca/my/software/show/21 Gaussian Software Page] <!--checked2015-->" (and the only contributor was "Jemmyhu"))
  • 10:05, 3 May 2019 Ppomorsk (Talk | contribs) deleted page KERAS (content was: "Documentation for KERAS is available at [https://docs.computecanada.ca/wiki/Keras Compute Canada wiki]. =NIX= Tested on COPPER running centos 6.9 by tyson@sharcnet.ca on Aug 1, 2018")
  • 10:04, 3 May 2019 Ppomorsk (Talk | contribs) deleted page GDL (content was: "Please refer to the GDL website for reference documentation ... http://gnudatalanguage.sourceforge.net/ <!--checked2015-->")
  • 10:04, 3 May 2019 Ppomorsk (Talk | contribs) deleted page RMPI (content was: "{{Software |package_name=RMPI |package_description=A package for R, a free software environment for statistical computing and graphics |package_idnumber=15 }} We do not provide an installation of Rmpi as part of the R installation....")
  • 10:03, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Using BLAS (LAPACK) routines with QD precision (62 digits). (content was: "#REDIRECT Using BLAS (LAPACK) routines with QD precision (62 digits)" (and the only contributor was "Ppomorsk"))
  • 10:03, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Scilab (content was: "#REDIRECT SCILAB" (and the only contributor was "Roberpj"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page PYTHON (content was: "#REDIRECTPython" (and the only contributor was "Ppomorsk"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Cloud Storage (content was: "#REDIRECT OwnCloud" (and the only contributor was "Edward"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page ImageMagick (content was: "#REDIRECT IMAGEMAGICK" (and the only contributor was "Roberpj"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Goblin (general compute cluster) (content was: "#REDIRECT Goblin" (and the only contributor was "Ppomorsk"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Reviews of Selected Development Stage Languages (content was: "#REDIRECT Development Stage Software Reviews" (and the only contributor was "Roberpj"))
  • 10:02, 3 May 2019 Ppomorsk (Talk | contribs) deleted page Clufflinks (content was: "#REDIRECT Cufflinks")
  • 16:15, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Portland (content was: "#REDIRECT PORTLAND" (and the only contributor was "Roberpj"))
  • 16:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Configuring your software environment with Modules (content was: "===Graham and Cedar=== The information presented below is for our legacy systems (Orca etc). The new Compute Canada national data centers, Graham and Cedar, use a somewhat different setup. Check the following link for details: https://d...")
  • 16:08, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Visualization Workstations (content was: "{{Template:GrahamUpdate}} ==About== ===Summary=== SHARCNET has a number of visualization workstations installed at particular partner institutions. Please see the [https://www.sharcnet.ca/my/systems Visualization Systems] list in the we...")
  • 16:07, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Monitoring Jobs (content was: "{{Template:LegacyPage}} This page provides useful information for monitoring and acquiring information about jobs that are scheduled, running or have finished running at SHARCNET. This could include finding the nodes the job is running...")
  • 16:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Dropbox (content was: "#REDIRECT OwnCloud {{LegacyPage}}")
  • 16:06, 2 May 2019 Ppomorsk (Talk | contribs) deleted page BLCR (content was: "{{Template:LegacyPage}} {{Software |package_name=BLCR |package_description=Application for checkpointing and restarting jobs |package_idnumber=74 }} =Introduction= Blcr is available for checkpointing and restarting serial or threaded jo...")
  • 16:05, 2 May 2019 Ppomorsk (Talk | contribs) deleted page UTIL (content was: "{{Template:LegacyPage}} {{Software |package_name=UTIL |package_description=A collection of tools for SHARCNET systems |package_idnumber=111 }} ==Overview== The util package is module loadable. To load util, use command: <pre> module l...")
  • 16:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page BIOSAMTOOLS (content was: "{{Ancient|27401}} {{Software |package_name=BIOSAMTOOLS |package_description=Perl interface to the libbam library for indexed and unindexed SAM/BAM sequence alignment databases. |package_idnumber=150 }} =Introduction= Provides the biosam...")
  • 16:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page FHI-AIMS (content was: "{{Ancient|27407}} ==INTRODUCTION== FHI-AIMS is accessible to members of the <i>ihamlito</i> sharcnet group sponsored by Dr.Hamilton from WLU. Before using the..." (and the only contributor was "Roberpj"))
  • 16:04, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Development Stage Software Reviews (content was: "{{Template:LegacyPage}} {{Ancient|27047}} This wiki page provides a editable list of development stage software not currently installed on sharcnet. A template structure is provided for adding information by staff and regular users ali...")
  • 16:02, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Pathscale (content was: "#REDIRECT PATHSCALE" (and the only contributor was "Roberpj"))
  • 16:01, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Owncloud (content was: "#REDIRECT OwnCloud" (and the only contributor was "Edward"))
  • 16:01, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MPC (content was: "{{Software |package_name=MPC |package_description=C library for the arithmetic of complex numbers with arbitrarily high precision and correct rounding of the result. |package_idnumber=148 }} =Introduction= The mpc sharcnet modules rov...")
  • 16:01, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Locally installed software (content was: "#REDIRECT Software Resources" (and the only contributor was "Merz"))
  • 15:59, 2 May 2019 Ppomorsk (Talk | contribs) deleted page IMSL (content was: "{{Template:LegacyPage}} {{Software |package_name=IMSL |package_description=Numerical Libraries |package_idnumber=53 }} ==Instruction for Release 5.0== <font color="red"> Please note, due to the lack of support for the specific compiler...")
  • 15:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GRACE (content was: "{{Software |package_name=GRACE |package_description=A 2D plotting tool descended from xmgr |package_idnumber=182 }} =Introduction= Provides GRACE on sharcnets f..." (and the only contributor was "Roberpj"))
  • 15:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GHC (content was: "{{Software |package_name=GHC |package_description= |package_idnumber=173 }} =Introduction= The sharcnet module provides the Glasgow Haskell Compiler GHC compile..." (and the only contributor was "Roberpj"))
  • 15:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GMP (content was: "{{Software |package_name=GMP |package_description=A portable library written in C for arbitrary precision arithmetic |package_idnumber=19 }} =GMP on new Compute Canada clusters (cedar and graham)= GMP has not yet been installed on ceda...")
  • 15:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page FIREFLY (content was: "{{Template:GrahamUpdate}} {{Software |package_name=FIREFLY |package_description=PC GAMESS/Firefly |package_idnumber=91 }} ==Introduction== The PC GAMESS/Firefly is an ab initio and DFT computational chemistry program developed to offer h...")
  • 15:56, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CP2K (content was: "{{Software |package_name=CP2K |package_description=Atomistic and Molecular Simulations of Solid State, Liquid, Molecular and Biological Systems |package_idnumber=161 }} <br> '''Note''' - if you are looking for '''potential''' and '''basi...")
  • 15:56, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CDF (content was: "{{Template:GrahamUpdate}} {{Software |package_name=CDF |package_description= Self-describing data format for the storage and manipulation of scalar and multidimensional data |package_idnumber=51 }} =Introduction= Scientific data manage...")
  • 15:55, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Cufflinks (content was: "{{Template:LegacyPage}} =2.1.1= Installed and tested on orca running centos 6.? by jemmyhu@sharcnet.ca on Apr24, 2013.<br> Downloaded cufflinks-2.1.1 from http://cufflinks.cbcb.umd.edu the Linux-64 binary version. [roberpj@orc-login2:/...")
  • 15:55, 2 May 2019 Ppomorsk (Talk | contribs) deleted page COREUTILS (content was: "{{Template:GrahamUpdate}} {{Software |package_name=COREUTILS |package_description= A set of basic GNU tools commonly used in shell scripts. |package_idnumber=143 }} =Introduction= This module provides a more recent version of the coreu...")
  • 15:55, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Cat (content was: "#REDIRECT CAT" (and the only contributor was "Isaac"))
  • 15:55, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CAT (content was: "{{LegacyPage}} {{System |cluster_name=cat |target_usage=General, emphasizing serial |system_idnumber=10 }} ==System Overview== {| class="wikitable" style="text-align:center" border="1" |- | CPU Model || Intel Xeon @ 2.4 GHz |- | Cores/n...")
  • 15:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page BitKinex (content was: "#REDIRECT WebDAV#Using a third party application (Windows)" (and the only contributor was "Edward"))
  • 15:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CMAKE (content was: "{{Software |package_name=CMAKE |package_description=Tools designed to build, test and package software |package_idnumber=122 }} For up to date information on CMAKE, go to [https://docs.computecanada.ca/wiki/CMake Compute Canada wiki].")
  • 15:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page CHARM++ (content was: "{{Template:LegacyPage}} {{Software |package_name=CHARM++ |package_description=library |package_idnumber=40 }} ==Introduction== Charm++ is a parallel object-oriented programming language based on C++ and developed in the Parallel Programm...")
  • 15:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Copper (content was: "{{System |cluster_name=copper |target_usage=threaded/mpi jobs, GPU jobs, large memory jobs |system_idnumber=108 }} == Hardware == * nodes 1 - 8 ** 16 CPU cores (Dual Intel Xeon E5-2630 v3 @ 2.4 GHz) ** 4 NVIDIA Tesla K80 GPU cards (8 Ke...")
  • 15:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Wobbie (content was: "{{System |cluster_name=wobbie |target_usage=General purpose |system_idnumber=29 }} ==Usage== Wobbie is a contributed cluster. Jobs from non-contributors are normal (i.e. not required to be short) but the contributor group sometimes ask...")
  • 11:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MONO (content was: "{{Template:GrahamUpdate}} {{Software |package_name=MONO |package_description=Runtime implementation of the ECMA Common Language Infrastructure. |package_idnumber..." (and the only contributor was "Roberpj"))
  • 11:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MERCURIAL (content was: "{{Software |package_name=MERCURIAL |package_description=Source control management tool |package_idnumber=102 }} =Introduction= Mercurial is a free, distributed source control management tool. It offers you the power to efficiently handl...")
  • 11:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MPFR (content was: "<!--checked2016--> {{Software |package_name=MPFR |package_description=To provide a library for multiple-precision floating-point computation |package_idnumber=76 }} =MPFR on new Compute Canada clusters (cedar and graham)= MPFR has not...")
  • 11:13, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MOLDEN (content was: "{{Software |package_name=MOLDEN |package_description=A pre- and post processing program of molecular and electronic structure |package_idnumber=144 }} =Usage= Molden is available on vdi-centos6, or viz10-uwo, viz11-uwo, module load the...")
  • 11:12, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MEEP (content was: "{{Template:LegacyPage}} ==MEEP== ticket-17704 Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems http://ab-initio.mit.edu/wiki/index.php/Meep It...")
  • 11:11, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Getting Started with MPI (content was: "== Foreward == If you would prefer to see videos and slides introducing MPI, SHARCNET has made available online General Interest webinars which are linked at the bottom of this page in the #Comments and Further Reading section. ==...")
  • 11:11, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Getting Started with SHARCNET (content was: "{{Template:GrahamUpdate}} <!--checked2016--> ==What is SHARCNET?== SHARCNET is a consortium of Canadian academic institutions who share a network of high performance..." (and the only contributor was "Isaac"))
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