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  • 10:59, 2 May 2019 Ppomorsk (Talk | contribs) deleted page IPM (content was: "{{Template:GrahamUpdate}} {{Software |package_name=IPM |package_description=Profiling library for parallel codes |package_idnumber=125 }} =Introduction= IPM (Integrated Performance Monitoring) is a portable profiling infrastructure for...")
  • 10:59, 2 May 2019 Ppomorsk (Talk | contribs) deleted page PATHSCALE (content was: "{{Template:LegacyPage}} {{Software |package_name=Pathscale |package_description=the Pathscale Compiler Suite |package_idnumber=44 }} =Introduction= Pathscale is a compiler. Presently SHARCNET provides version 4 of the compiler. It u...")
  • 10:59, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Quantifying the Importance of Horizontal Gene Transfer for Bacterial Genome Evolution (content was: "This project was conducted in the first round of SHARCNET's dedicated programming support competition. It mainly concerned developing a program that reads in the sequences of all genes present o...")
  • 10:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page ROOT (content was: "{{Template:Outdated}} ===about=== [http://root.cern.ch/drupal/ ROOT] ''The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way.'' ===instal...")
  • 10:58, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Unsupported Software Documentation (content was: "#REDIRECT Unsupported Software" (and the only contributor was "Roberpj"))
  • 10:57, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Software Resources (content was: "#REDIRECT Unsupported Software Documentation" (and the only contributor was "Merz"))
  • 10:56, 2 May 2019 Ppomorsk (Talk | contribs) deleted page UCSC Kent Utilities (content was: "{{Template:LegacyPage}} ==Overview== The "UCSC Kent Utilities" is a collection of utilities for performing genomics and related work that was used to build the web based [http://genome.ucsc.edu/cgi-bin/hgTracks?org=human UCSC Genome Bro...")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page MAFFT (content was: "{{Template:Outdated}} {{Template:LegacyPage}} '''Update November 2014''': These instructions were written for the older SHARCNET environment. It should be possible to build MAFFT for the present SHARCNET environment without any deviati...")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page LinBox (content was: "{{Template:Outdated}} {{Template:GrahamUpdate}} '''Update November 2014''': These instructions are from 2010 and were created for the SHARCNET environment at that time. It should be possible to install this software on the newer operat...")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page KmerGenie (content was: "=kmergenie-1.6741= Built successfully on orca under centos6.4 using the system GCC, see [https://www.sharcnet.ca/my/problems/ticket/23952 ticket 23952]. ssh orca.sharcnet.ca wget http://kmergenie.bx.psu.edu/kmergenie-1.6741.tar.gz t...")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Vi and vim configuration (content was: "This page is now included in the SHARCNET Vim Documentation page at: VIM#Configuration <!--checked2015-->")
  • 10:54, 2 May 2019 Ppomorsk (Talk | contribs) deleted page VIM (content was: "{{Software |package_name=VIM |package_description=Text editor |package_idnumber=100 }} =Introduction= The vim console text editor can be started by typing <i>vim</i>. A graphical version is also available on most Sharcnet systems: <...")
  • 10:53, 2 May 2019 Ppomorsk (Talk | contribs) deleted page OwnCloud (content was: "{{LegacyPage}} <div class="alert-info" style="margin-bottom: 10pt"> <div style="float:left; vertical-align:top; text-align: center; font-weight:bold; font-size: 3em; color: white; background-color: red; height: 0.8em; width: 1.2em; pad...")
  • 10:53, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Enzo (content was: "{{Template:Outdated}} =Introduction= Enzo is a parallel adaptive mesh refinement (AMR) grid-based code for simulating structure formation in the Universe. It..." (and the only contributor was "Razoumov"))
  • 10:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page HOOMD-blue (content was: "'''HOOMD-blue''' is a general-purpose particle simulation toolkit. It scales from a single CPU core to thousands of GPUs. =Install from git= Tested on Compute Canada cluster "graham" November 2017 by <ppomorsk@sharcnet.ca> <br> modul...")
  • 10:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page BINUTILS (content was: "{{Template:Outdated}} {{Software |package_name=BINUTILS |package_description=A collection of programming tools for the manipulation of object code |package_idnumber=114 }} =Intrduction= To load the most recent binutils module do: <pre...")
  • 10:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page COMPILE (content was: "<!--checked2016--> {{Template:Outdated}} {{Software |package_name=COMPILE |package_description=Provide "wrappers" that permit generic compilation |package_idnumber=129 }} compile is loaded by default in the SHARCNET user-environment/1.0...")
  • 10:52, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Cutadapt (content was: "{{template:LegacyPage}} read more about this package here: https://cutadapt.readthedocs.org/en/stable/ To install on kraken in my home directory I'd do: ssh kraken.sharcnet.ca module load python wget http://cutadapt.googlecode.com...")
  • 10:51, 2 May 2019 Ppomorsk (Talk | contribs) deleted page GRAPHVIZ (content was: "{{Template:GrahamUpdate}} {{Template:Outdated}} {{Software |package_name=GRAPHVIZ |package_description=Graph visualization software |package_idnumber=98 }} =Version Selection= Please refer to the documentation [http://www.graphviz.org/...")
  • 10:51, 2 May 2019 Ppomorsk (Talk | contribs) deleted page Geneious (content was: "{{Template:LegacyPage}} This software was test installed for a group on the SHARCNET vdi-centos6 host in March 2015. There is a trial license which was not configured at the time. Please email help@sharcnet.ca if you need help setting...")
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