https://www.sharcnet.ca/help/index.php?title=LSDYNA&feed=atom&action=history
LSDYNA - Revision history
2024-03-28T16:23:54Z
Revision history for this page on the wiki
MediaWiki 1.25.2
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17951&oldid=prev
Edward at 14:25, 6 June 2019
2019-06-06T14:25:42Z
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 14:25, 6 June 2019</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L1" >Line 1:</td>
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<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>{{<del class="diffchange diffchange-inline">Tamplate</del>:CCMissing}}</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>{{<ins class="diffchange diffchange-inline">Template</ins>:CCMissing}}</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>{{Software</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>{{Software</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>|package_name=LSDYNA</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>|package_name=LSDYNA</div></td></tr>
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Edward
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17950&oldid=prev
Edward at 14:25, 6 June 2019
2019-06-06T14:25:30Z
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 14:25, 6 June 2019</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L1" >Line 1:</td>
<td colspan="2" class="diff-lineno">Line 1:</td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">{{Tamplate:CCMissing}}</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>{{Software</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>{{Software</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>|package_name=LSDYNA</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>|package_name=LSDYNA</div></td></tr>
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Edward
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17542&oldid=prev
Roberpj: /* Command Line Use */
2019-02-08T20:16:55Z
<p><span dir="auto"><span class="autocomment">Command Line Use</span></span></p>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 20:16, 8 February 2019</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L413" >Line 413:</td>
<td colspan="2" class="diff-lineno">Line 413:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>There are no special notes at the present time in regards to using lsdyna on graham.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>There are no special notes at the present time in regards to using lsdyna on graham.</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Command Line Use==</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Command Line Use==</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">Following the upgrade of orca to the compute canada module stack, the orca development nodes were discontinued.<br></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">Therefore this section is no longer relevent and remain for historical purposes only.</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>Parallel lsdyna jobs can be run interactively on the command line (outside the queue) for short run testing purposes as follows:</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>Parallel lsdyna jobs can be run interactively on the command line (outside the queue) for short run testing purposes as follows:</div></td></tr>
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Roberpj
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17540&oldid=prev
Roberpj: /* Graham Cluster */
2019-02-08T20:14:03Z
<p><span dir="auto"><span class="autocomment">Graham Cluster</span></span></p>
<table class='diff diff-contentalign-left'>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 20:14, 8 February 2019</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L412" >Line 412:</td>
<td colspan="2" class="diff-lineno">Line 412:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Graham Cluster==</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Graham Cluster==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>There are no special notes at <del class="diffchange diffchange-inline">present regarding </del>the <del class="diffchange diffchange-inline">usage of </del>lsdyna on graham<del class="diffchange diffchange-inline">,</del></div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>There are no special notes at the <ins class="diffchange diffchange-inline">present time in regards to using </ins>lsdyna on graham<ins class="diffchange diffchange-inline">.</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Command Line Use==</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Command Line Use==</div></td></tr>
</table>
Roberpj
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17539&oldid=prev
Roberpj: /* Graham Cluster */
2019-02-08T20:13:27Z
<p><span dir="auto"><span class="autocomment">Graham Cluster</span></span></p>
<table class='diff diff-contentalign-left'>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 20:13, 8 February 2019</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L412" >Line 412:</td>
<td colspan="2" class="diff-lineno">Line 412:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Graham Cluster==</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Graham Cluster==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> </div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">There are no special notes at present regarding the usage of lsdyna on graham,</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Command Line Use==</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>==Command Line Use==</div></td></tr>
</table>
Roberpj
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17169&oldid=prev
Roberpj: /* MPI Job */
2018-12-06T21:24:32Z
<p><span dir="auto"><span class="autocomment">MPI Job</span></span></p>
<table class='diff diff-contentalign-left'>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 21:24, 6 December 2018</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L315" >Line 315:</td>
<td colspan="2" class="diff-lineno">Line 315:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>To run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> efficiently over several compute nodes with many cores requires using orca's xeon nodes as shown in <b> mympijob4.sh</b> below.  To run lsdyna on orca's opteron nodes with <i>module lsdyna/mpp/r712.95028</i> requires using only <b>one</b> opteron node as shown in <b> mympijob5.sh</b> below.  The other legacy sharcnet lsdyna mpp modules, as shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested <del class="diffchange diffchange-inline">- if </del>you want to use one but cannot get it working please open a ticket.  Note that lines containing a space between "# and SBATCH" are comments.  To activate such line(s) required removal of the space ie) "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable.  </div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>To run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> efficiently over several compute nodes with many cores requires using orca's xeon nodes as shown in <b> mympijob4.sh</b> below.  To run lsdyna on orca's opteron nodes with <i>module lsdyna/mpp/r712.95028</i> requires using only <b>one</b> opteron node as shown in <b> mympijob5.sh</b> below.  The other legacy sharcnet lsdyna mpp modules, as shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested<ins class="diffchange diffchange-inline">. If </ins>you want to use one but cannot get it working please open a ticket.  Note that lines containing a space between "# and SBATCH" are comments.  To activate such line(s) required removal of the space ie) "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable.  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td></tr>
</table>
Roberpj
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17168&oldid=prev
Roberpj: /* MPI Job */
2018-12-06T21:21:00Z
<p><span dir="auto"><span class="autocomment">MPI Job</span></span></p>
<table class='diff diff-contentalign-left'>
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr style='vertical-align: top;'>
<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 21:21, 6 December 2018</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L315" >Line 315:</td>
<td colspan="2" class="diff-lineno">Line 315:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">In order to </del>run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> over several nodes with many cores requires using <del class="diffchange diffchange-inline">the </del>orca xeon nodes as shown in <del class="diffchange diffchange-inline">the </del><b> mympijob4.sh</b> <del class="diffchange diffchange-inline">slurm submission script </del>below<del class="diffchange diffchange-inline">, attempted usage </del>on <del class="diffchange diffchange-inline">the </del>opteron nodes <del class="diffchange diffchange-inline">will result in core sharing and exponential job slowdown.  It is however possible to use </del><i>module lsdyna/mpp/r712.95028</i> <del class="diffchange diffchange-inline">on a </del><b><del class="diffchange diffchange-inline">single</del></b> opteron node as shown in <del class="diffchange diffchange-inline">the </del><b> mympijob5.sh</b> <del class="diffchange diffchange-inline">slurm script </del>below.  <del class="diffchange diffchange-inline">Lines containing a space between "# and SBATCH" are comments, to activate such as line remove the space to form "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable. </del>The other legacy sharcnet lsdyna mpp modules shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested - if you want to use one but cannot get it working please open a ticket.</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">To </ins>run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> <ins class="diffchange diffchange-inline">efficiently </ins>over several <ins class="diffchange diffchange-inline">compute </ins>nodes with many cores requires using orca<ins class="diffchange diffchange-inline">'s </ins>xeon nodes as shown in <b> mympijob4.sh</b> below<ins class="diffchange diffchange-inline">.  To run lsdyna </ins>on <ins class="diffchange diffchange-inline">orca's </ins>opteron nodes <ins class="diffchange diffchange-inline">with </ins><i>module lsdyna/mpp/r712.95028</i> <ins class="diffchange diffchange-inline">requires using only </ins><b><ins class="diffchange diffchange-inline">one</ins></b> opteron node as shown in <b> mympijob5.sh</b> below.  The other legacy sharcnet lsdyna mpp modules<ins class="diffchange diffchange-inline">, as </ins>shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested - if you want to use one but cannot get it working please open a ticket<ins class="diffchange diffchange-inline">.  Note that lines containing a space between "# and SBATCH" are comments.  To activate such line(s) required removal of the space ie) "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable</ins>.  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td></tr>
</table>
Roberpj
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17167&oldid=prev
Roberpj: /* MPI Job */
2018-12-06T21:07:46Z
<p><span dir="auto"><span class="autocomment">MPI Job</span></span></p>
<table class='diff diff-contentalign-left'>
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr style='vertical-align: top;'>
<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 21:07, 6 December 2018</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L315" >Line 315:</td>
<td colspan="2" class="diff-lineno">Line 315:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>In order to run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> over several nodes with many cores requires using the orca xeon nodes as shown in the <b> mympijob4.sh</b> slurm submission script below. <del class="diffchange diffchange-inline">  </del>It is possible to use <del class="diffchange diffchange-inline">the opteron orca nodes with </del><i>module lsdyna/mpp/r712.95028</i> <del class="diffchange diffchange-inline">by running </del>on <del class="diffchange diffchange-inline">only one </del>node<del class="diffchange diffchange-inline">, </del>as shown in the <b> mympijob5.sh</b> slurm script below.  Lines containing a space between "# and SBATCH" are comments, to activate such as line remove the space to form "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable. The other legacy sharcnet lsdyna mpp modules shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested - if you want to use one but cannot get it working please open a ticket.</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>In order to run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> over several nodes with many cores requires using the orca xeon nodes as shown in the <b> mympijob4.sh</b> slurm submission script below<ins class="diffchange diffchange-inline">, attempted usage on the opteron nodes will result in core sharing and exponential job slowdown</ins>. <ins class="diffchange diffchange-inline">  </ins>It is <ins class="diffchange diffchange-inline">however </ins>possible to use <i>module lsdyna/mpp/r712.95028</i> on <ins class="diffchange diffchange-inline">a <b>single</b> opteron </ins>node as shown in the <b> mympijob5.sh</b> slurm script below.  Lines containing a space between "# and SBATCH" are comments, to activate such as line remove the space to form "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable. The other legacy sharcnet lsdyna mpp modules shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested - if you want to use one but cannot get it working please open a ticket.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td></tr>
</table>
Roberpj
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17166&oldid=prev
Roberpj: /* MPI Job */
2018-12-06T21:04:44Z
<p><span dir="auto"><span class="autocomment">MPI Job</span></span></p>
<table class='diff diff-contentalign-left'>
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr style='vertical-align: top;'>
<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 21:04, 6 December 2018</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L315" >Line 315:</td>
<td colspan="2" class="diff-lineno">Line 315:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>In order to <del class="diffchange diffchange-inline">run </del>run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> <del class="diffchange diffchange-inline">across a </del>several nodes with <del class="diffchange diffchange-inline">a large number of processors </del>requires<del class="diffchange diffchange-inline">, </del>the xeon nodes <del class="diffchange diffchange-inline">on orca must be specified </del>as shown in the <b> mympijob4.sh</b> slurm submission script below.    It is possible to use the opteron orca nodes with <i>module lsdyna/mpp/r712.95028</i> by running on only one node, as shown in the <b> mympijob5.sh</b> slurm script below.  Lines containing a space between "# and SBATCH" are comments, to activate such as line remove the space to form "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable. The other legacy sharcnet lsdyna mpp modules shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested - if you want to use one but cannot get it working please open a ticket.</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>In order to run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> <ins class="diffchange diffchange-inline">over </ins>several nodes with <ins class="diffchange diffchange-inline">many cores </ins>requires <ins class="diffchange diffchange-inline">using </ins>the <ins class="diffchange diffchange-inline">orca </ins>xeon nodes as shown in the <b> mympijob4.sh</b> slurm submission script below.    It is possible to use the opteron orca nodes with <i>module lsdyna/mpp/r712.95028</i> by running on only one node, as shown in the <b> mympijob5.sh</b> slurm script below.  Lines containing a space between "# and SBATCH" are comments, to activate such as line remove the space to form "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable. The other legacy sharcnet lsdyna mpp modules shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested - if you want to use one but cannot get it working please open a ticket.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td></tr>
</table>
Roberpj
https://www.sharcnet.ca/help/index.php?title=LSDYNA&diff=17165&oldid=prev
Roberpj: /* MPI Job */
2018-12-06T21:03:34Z
<p><span dir="auto"><span class="autocomment">MPI Job</span></span></p>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 21:03, 6 December 2018</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===MPI Job ===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>In order to run run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> across a several nodes with a large number of processors requires, the xeon nodes on orca must be specified as shown in the <b> mympijob4.sh</b> slurm submission script below.    It is possible to use the opteron orca nodes with <i>module lsdyna/mpp/r712.95028</i> by running on only one node, as shown in the <b> mympijob5.sh</b> slurm script below.  Lines containing a space between "# and SBATCH" are comments, to activate such as line remove the space to form "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable. The other legacy sharcnet lsdyna mpp modules shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested<del class="diffchange diffchange-inline">, </del>if you want to use one but cannot get it <del class="diffchange diffchange-inline">to work following the scripts below </del>please open a ticket.</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>In order to run run the sharcnet legacy <i>module lsdyna/mpp/r712.95028</i> across a several nodes with a large number of processors requires, the xeon nodes on orca must be specified as shown in the <b> mympijob4.sh</b> slurm submission script below.    It is possible to use the opteron orca nodes with <i>module lsdyna/mpp/r712.95028</i> by running on only one node, as shown in the <b> mympijob5.sh</b> slurm script below.  Lines containing a space between "# and SBATCH" are comments, to activate such as line remove the space to form "#SBATCH".  Its recommended to use <i>module ls-dyna-mpi</i> on graham instead since the machine is far newer, faster and reliable. The other legacy sharcnet lsdyna mpp modules shown in the Availability Table  lsdyna/mpp/ls971.r85718, lsdyna/mpp/ls980B1.011113, lsdyna/mpp/r611.79036, lsdyna/mpp/r611.80542, lsdyna/mpp/r711.88920, lsdyna/mpp/r800.95359 and lsdyna/mpp/r901.109912 have yet to be tested <ins class="diffchange diffchange-inline">- </ins>if you want to use one but cannot get it <ins class="diffchange diffchange-inline">working </ins>please open a ticket.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Multi Node Slurm Script====</div></td></tr>
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Roberpj