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{{Software
 
{{Software
 
|package_name=BIOPERL
 
|package_name=BIOPERL
|package_description=Suite of programs that allow users to carry out molecular dynamics simulations
+
|package_description=Toolkit of perl modules useful in building bioinformatics solutions in Perl
 
|package_idnumber=78
 
|package_idnumber=78
 
}}
 
}}

Revision as of 11:31, 26 March 2012

BIOPERL
Description: Toolkit of perl modules useful in building bioinformatics solutions in Perl
SHARCNET Package information: see BIOPERL software page in web portal
Full list of SHARCNET supported software



To use bioperl load the module as follows:

module load bioperl/1.6.1


Please note that the bioperl module now sets the PERL5LIB variable. Thus the following perl script header lines are no longer required:

#!/usr/bin/perl
use lib "/opt/sharcnet/bioperl/1.6.1/lib/perl5";
use Bio::Perl;