HCP with HPC: Surface Based Neuroimaging Analysis

Description: This 1/2 day course will focus of cortical surface based neuroimaging analysis. We will talk use SciNet to run freesurfer's recon-all pipeline to define the cortical surfaces in our datasets. We will then use Connectome-Workbench (tools from the Human Connectome Project, or HCP) to analyse and visualize our data.

Instructor: Erin Dickie and Dawn Smith, CAMH.

Prerequisites: Some experience with bash/python scripting is an asset.